Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 17 studies | 39% ± 19% | |
endothelial cell | 13 studies | 33% ± 13% | |
macrophage | 10 studies | 29% ± 10% | |
oligodendrocyte | 10 studies | 33% ± 8% | |
smooth muscle cell | 8 studies | 27% ± 6% | |
oligodendrocyte precursor cell | 7 studies | 26% ± 8% | |
adipocyte | 7 studies | 22% ± 5% | |
microglial cell | 6 studies | 28% ± 10% | |
epithelial cell | 6 studies | 33% ± 13% | |
monocyte | 6 studies | 38% ± 14% | |
fibroblast | 6 studies | 31% ± 12% | |
pericyte | 6 studies | 29% ± 12% | |
retinal cone cell | 5 studies | 27% ± 10% | |
mast cell | 5 studies | 22% ± 5% | |
endothelial cell of lymphatic vessel | 5 studies | 26% ± 9% | |
interneuron | 4 studies | 18% ± 1% | |
neuron | 4 studies | 40% ± 16% | |
myeloid cell | 4 studies | 24% ± 4% | |
dendritic cell | 4 studies | 27% ± 6% | |
ciliated cell | 4 studies | 28% ± 7% | |
lymphocyte | 4 studies | 33% ± 14% | |
Mueller cell | 4 studies | 46% ± 22% | |
retinal rod cell | 4 studies | 30% ± 9% | |
hepatocyte | 4 studies | 54% ± 15% | |
glutamatergic neuron | 4 studies | 29% ± 7% | |
B cell | 4 studies | 24% ± 6% | |
classical monocyte | 3 studies | 27% ± 7% | |
CD4-positive, alpha-beta T cell | 3 studies | 23% ± 2% | |
non-classical monocyte | 3 studies | 24% ± 5% | |
GABAergic neuron | 3 studies | 30% ± 6% | |
ependymal cell | 3 studies | 46% ± 14% | |
T cell | 3 studies | 21% ± 5% | |
alveolar macrophage | 3 studies | 28% ± 7% | |
club cell | 3 studies | 21% ± 4% | |
natural killer cell | 3 studies | 29% ± 5% | |
respiratory goblet cell | 3 studies | 33% ± 12% | |
basal cell | 3 studies | 21% ± 2% | |
mesothelial cell | 3 studies | 45% ± 19% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 5755.11 | 245 / 245 | 100% | 27.92 | 502 / 502 |
breast | 100% | 2075.05 | 459 / 459 | 99% | 24.43 | 1107 / 1118 |
kidney | 100% | 3173.46 | 89 / 89 | 99% | 29.18 | 892 / 901 |
thymus | 100% | 3030.79 | 653 / 653 | 99% | 15.34 | 597 / 605 |
brain | 99% | 2243.56 | 2621 / 2642 | 99% | 17.30 | 698 / 705 |
lung | 99% | 1824.80 | 574 / 578 | 97% | 20.78 | 1115 / 1155 |
liver | 100% | 2272.47 | 226 / 226 | 95% | 13.20 | 387 / 406 |
esophagus | 100% | 3319.22 | 1445 / 1445 | 95% | 17.81 | 173 / 183 |
uterus | 100% | 10589.17 | 170 / 170 | 94% | 19.39 | 432 / 459 |
ovary | 100% | 3623.23 | 180 / 180 | 94% | 17.43 | 404 / 430 |
pancreas | 95% | 963.83 | 313 / 328 | 97% | 13.57 | 172 / 178 |
intestine | 99% | 2474.60 | 958 / 966 | 91% | 12.54 | 477 / 527 |
stomach | 100% | 2091.41 | 359 / 359 | 89% | 13.10 | 255 / 286 |
bladder | 100% | 4951.29 | 21 / 21 | 89% | 12.90 | 447 / 504 |
skin | 100% | 2366.69 | 1807 / 1809 | 86% | 11.40 | 406 / 472 |
adrenal gland | 100% | 2501.08 | 258 / 258 | 86% | 12.80 | 197 / 230 |
adipose | 100% | 2066.83 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 5126.60 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 1878.01 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 13.43 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.86 | 1 / 1 |
peripheral blood | 99% | 3774.43 | 916 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 14.24 | 78 / 80 |
lymph node | 0% | 0 | 0 / 0 | 93% | 11.08 | 27 / 29 |
muscle | 87% | 1035.83 | 697 / 803 | 0% | 0 | 0 / 0 |
heart | 86% | 944.53 | 742 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007605 | Biological process | sensory perception of sound |
GO_0090263 | Biological process | positive regulation of canonical Wnt signaling pathway |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_0050821 | Biological process | protein stabilization |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0006508 | Biological process | proteolysis |
GO_0043161 | Biological process | proteasome-mediated ubiquitin-dependent protein catabolic process |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0072686 | Cellular component | mitotic spindle |
GO_0000118 | Cellular component | histone deacetylase complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0017053 | Cellular component | transcription repressor complex |
GO_0005634 | Cellular component | nucleus |
GO_0003714 | Molecular function | transcription corepressor activity |
GO_0005515 | Molecular function | protein binding |
GO_0042393 | Molecular function | histone binding |
GO_0000976 | Molecular function | transcription cis-regulatory region binding |
Gene name | TBL1X |
Protein name | F-box-like/WD repeat-containing protein TBL1X (SMAP55) (Transducin beta-like protein 1X) (Transducin-beta-like protein 1, X-linked) Transducin beta like 1 X-linked |
Synonyms | TBL1 |
Description | FUNCTION: F-box-like protein involved in the recruitment of the ubiquitin/19S proteasome complex to nuclear receptor-regulated transcription units . Plays an essential role in transcription activation mediated by nuclear receptors. Probably acts as integral component of corepressor complexes that mediates the recruitment of the 19S proteasome complex, leading to the subsequent proteasomal degradation of transcription repressor complexes, thereby allowing cofactor exchange . . |
Accessions | ENST00000645353.2 [O60907-1] ENST00000645686.1 [O60907-1] ENST00000647060.1 C9J5F9 A0A2R8Y757 C9JCW3 ENST00000647172.1 O60907 A0A2R8YFW3 ENST00000452824.5 ENST00000646640.1 [O60907-1] ENST00000683056.1 ENST00000424279.6 [O60907-2] ENST00000407597.7 [O60907-1] ENST00000380961.5 [O60907-2] ENST00000422314.5 A0A804HJZ5 |