Name | Number of supported studies | Average coverage | |
---|---|---|---|
B cell | 33 studies | 31% ± 16% | |
endothelial cell | 30 studies | 39% ± 22% | |
memory B cell | 17 studies | 24% ± 8% | |
plasma cell | 17 studies | 41% ± 22% | |
naive B cell | 15 studies | 28% ± 9% | |
microglial cell | 15 studies | 73% ± 19% | |
macrophage | 13 studies | 38% ± 16% | |
oligodendrocyte precursor cell | 12 studies | 36% ± 14% | |
myeloid cell | 8 studies | 35% ± 13% | |
GABAergic neuron | 7 studies | 32% ± 9% | |
epithelial cell | 7 studies | 31% ± 9% | |
CD4-positive, alpha-beta T cell | 7 studies | 27% ± 9% | |
endothelial cell of lymphatic vessel | 7 studies | 42% ± 8% | |
type I pneumocyte | 7 studies | 32% ± 12% | |
club cell | 6 studies | 29% ± 16% | |
respiratory goblet cell | 6 studies | 44% ± 12% | |
IgG plasma cell | 6 studies | 24% ± 11% | |
T cell | 6 studies | 31% ± 11% | |
glutamatergic neuron | 6 studies | 43% ± 18% | |
plasmablast | 5 studies | 29% ± 15% | |
capillary endothelial cell | 5 studies | 29% ± 18% | |
basal cell | 5 studies | 31% ± 11% | |
CD8-positive, alpha-beta T cell | 5 studies | 27% ± 7% | |
cardiac muscle cell | 5 studies | 33% ± 12% | |
dendritic cell | 5 studies | 25% ± 5% | |
mesothelial cell | 5 studies | 37% ± 13% | |
vein endothelial cell | 5 studies | 42% ± 24% | |
hepatocyte | 5 studies | 65% ± 14% | |
type II pneumocyte | 5 studies | 30% ± 6% | |
astrocyte | 5 studies | 28% ± 15% | |
endothelial cell of sinusoid | 4 studies | 49% ± 15% | |
interneuron | 4 studies | 27% ± 8% | |
immature B cell | 4 studies | 21% ± 3% | |
retinal ganglion cell | 4 studies | 33% ± 5% | |
endothelial cell of vascular tree | 4 studies | 40% ± 10% | |
luminal cell of prostate epithelium | 4 studies | 33% ± 15% | |
ciliated cell | 4 studies | 22% ± 7% | |
monocyte | 4 studies | 26% ± 10% | |
natural killer cell | 4 studies | 30% ± 6% | |
leukocyte | 4 studies | 64% ± 11% | |
abnormal cell | 4 studies | 29% ± 5% | |
renal principal cell | 4 studies | 59% ± 8% | |
IgA plasma cell | 4 studies | 28% ± 19% | |
regulatory T cell | 4 studies | 25% ± 7% | |
CD4-positive, alpha-beta memory T cell | 3 studies | 21% ± 3% | |
smooth muscle cell | 3 studies | 26% ± 7% | |
effector memory CD8-positive, alpha-beta T cell | 3 studies | 31% ± 11% | |
glomerular endothelial cell | 3 studies | 37% ± 0% | |
neuron | 3 studies | 30% ± 2% | |
endocardial cell | 3 studies | 55% ± 20% | |
mononuclear phagocyte | 3 studies | 22% ± 4% | |
mucosal invariant T cell | 3 studies | 24% ± 10% | |
germinal center B cell | 3 studies | 26% ± 6% | |
lymphocyte | 3 studies | 49% ± 9% | |
transit amplifying cell | 3 studies | 32% ± 16% | |
fibroblast | 3 studies | 17% ± 1% | |
renal alpha-intercalated cell | 3 studies | 26% ± 6% | |
mural cell | 3 studies | 42% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 44187.92 | 226 / 226 | 99% | 155.90 | 401 / 406 |
prostate | 100% | 7403.06 | 245 / 245 | 96% | 101.60 | 481 / 502 |
lung | 100% | 4418.28 | 577 / 578 | 87% | 34.64 | 1001 / 1155 |
kidney | 100% | 8282.98 | 89 / 89 | 83% | 32.80 | 747 / 901 |
ovary | 85% | 1359.66 | 153 / 180 | 97% | 66.14 | 415 / 430 |
brain | 83% | 1901.26 | 2201 / 2642 | 97% | 33.88 | 683 / 705 |
stomach | 89% | 1507.28 | 319 / 359 | 90% | 44.40 | 257 / 286 |
breast | 99% | 3963.28 | 455 / 459 | 78% | 29.87 | 875 / 1118 |
thymus | 100% | 4876.32 | 650 / 653 | 77% | 36.73 | 464 / 605 |
intestine | 86% | 3106.09 | 830 / 966 | 86% | 37.87 | 454 / 527 |
uterus | 98% | 3375.78 | 167 / 170 | 59% | 23.58 | 271 / 459 |
skin | 63% | 1027.91 | 1134 / 1809 | 89% | 44.25 | 422 / 472 |
bladder | 100% | 1820.71 | 21 / 21 | 43% | 16.65 | 215 / 504 |
esophagus | 82% | 1333.19 | 1184 / 1445 | 59% | 20.03 | 108 / 183 |
pancreas | 37% | 418.51 | 120 / 328 | 79% | 21.55 | 141 / 178 |
adrenal gland | 97% | 2428.52 | 250 / 258 | 18% | 3.58 | 42 / 230 |
lymph node | 0% | 0 | 0 / 0 | 100% | 119.60 | 29 / 29 |
spleen | 100% | 12327.46 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 5453.88 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 4283.36 | 1198 / 1204 | 0% | 0 | 0 / 0 |
heart | 97% | 3199.93 | 838 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 92% | 8741.81 | 856 / 929 | 0% | 0 | 0 / 0 |
muscle | 77% | 1249.03 | 621 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 64% | 19.18 | 29 / 45 |
eye | 0% | 0 | 0 / 0 | 46% | 7.36 | 37 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0016266 | Biological process | O-glycan processing |
GO_0018279 | Biological process | protein N-linked glycosylation via asparagine |
GO_2000110 | Biological process | negative regulation of macrophage apoptotic process |
GO_0032946 | Biological process | positive regulation of mononuclear cell proliferation |
GO_0045471 | Biological process | response to ethanol |
GO_0050922 | Biological process | negative regulation of chemotaxis |
GO_0097503 | Biological process | sialylation |
GO_0006959 | Biological process | humoral immune response |
GO_1900024 | Biological process | regulation of substrate adhesion-dependent cell spreading |
GO_0019082 | Biological process | viral protein processing |
GO_0006054 | Biological process | N-acetylneuraminate metabolic process |
GO_0005576 | Cellular component | extracellular region |
GO_0000138 | Cellular component | Golgi trans cisterna |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005797 | Cellular component | Golgi medial cisterna |
GO_0000139 | Cellular component | Golgi membrane |
GO_0032580 | Cellular component | Golgi cisterna membrane |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0008373 | Molecular function | sialyltransferase activity |
GO_0003835 | Molecular function | beta-galactoside alpha-2,6-sialyltransferase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | ST6GAL1 |
Protein name | Beta-galactoside alpha-2,6-sialyltransferase 1 beta-galactoside alpha-(2,6)-sialyltransferase (EC 2.4.3.1) Beta-galactoside alpha-2,6-sialyltransferase 1 (Alpha 2,6-ST 1) (EC 2.4.3.1) (B-cell antigen CD75) (CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,6-sialyltransferase 1) (ST6Gal I) (ST6GalI) (Sialyltransferase 1) Alternative protein ST6GAL1 ST6 beta-galactoside alpha-2,6-sialyltransferase 1 |
Synonyms | SIAT1 |
Description | FUNCTION: Transfers sialic acid from CMP-sialic acid to galactose-containing acceptor substrates. . |
Accessions | ENST00000417392.5 ENST00000676633.1 [P15907-1] C9JFM4 ENST00000448044.5 [P15907-1] ENST00000430309.5 C9IYS8 ENST00000438590.5 ENST00000458216.5 ENST00000169298.8 [P15907-1] C9JKG0 ENST00000416235 ENST00000427315.5 ENST00000448408.5 ENST00000457772.6 [P15907-2] P15907 C9J6X5 C9JH16 ENST00000423451.5 ENST00000416235.6 [P15907-1] ENST00000677292.1 [P15907-1] C9JR47 ENST00000442023.1 C9JI90 ENST00000455441.5 C9JPG6 H7C472 C9JAT4 ENST00000440338.5 C9K0R8 C9JVK7 ENST00000446170.1 C9JTR0 ENST00000448449.1 L8E992 |