Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| macrophage | 35 studies | 33% ± 14% | |
| B cell | 32 studies | 25% ± 6% | |
| endothelial cell | 25 studies | 27% ± 10% | |
| classical monocyte | 22 studies | 33% ± 10% | |
| non-classical monocyte | 20 studies | 33% ± 11% | |
| monocyte | 19 studies | 33% ± 9% | |
| conventional dendritic cell | 19 studies | 27% ± 11% | |
| memory B cell | 17 studies | 23% ± 6% | |
| endothelial cell of lymphatic vessel | 16 studies | 28% ± 8% | |
| naive B cell | 16 studies | 21% ± 5% | |
| microglial cell | 15 studies | 48% ± 19% | |
| plasmacytoid dendritic cell | 15 studies | 37% ± 13% | |
| myeloid cell | 15 studies | 33% ± 14% | |
| dendritic cell | 14 studies | 28% ± 14% | |
| natural killer cell | 14 studies | 19% ± 4% | |
| pericyte | 14 studies | 24% ± 6% | |
| capillary endothelial cell | 12 studies | 22% ± 5% | |
| fibroblast | 11 studies | 26% ± 8% | |
| smooth muscle cell | 11 studies | 26% ± 6% | |
| neutrophil | 9 studies | 25% ± 8% | |
| CD16-negative, CD56-bright natural killer cell, human | 9 studies | 21% ± 3% | |
| alveolar macrophage | 8 studies | 33% ± 13% | |
| endothelial cell of artery | 8 studies | 23% ± 6% | |
| mast cell | 8 studies | 19% ± 3% | |
| glutamatergic neuron | 7 studies | 41% ± 24% | |
| mononuclear phagocyte | 6 studies | 35% ± 9% | |
| platelet | 6 studies | 23% ± 8% | |
| epithelial cell | 6 studies | 26% ± 8% | |
| vein endothelial cell | 6 studies | 28% ± 10% | |
| endothelial cell of vascular tree | 6 studies | 20% ± 4% | |
| hematopoietic precursor cell | 5 studies | 30% ± 6% | |
| leukocyte | 5 studies | 28% ± 12% | |
| basal cell | 5 studies | 23% ± 9% | |
| brush cell | 5 studies | 54% ± 18% | |
| ciliated cell | 5 studies | 21% ± 3% | |
| innate lymphoid cell | 5 studies | 23% ± 5% | |
| GABAergic neuron | 4 studies | 41% ± 15% | |
| megakaryocyte | 4 studies | 27% ± 8% | |
| CD16-positive, CD56-dim natural killer cell, human | 4 studies | 19% ± 4% | |
| immature B cell | 4 studies | 24% ± 4% | |
| adipocyte | 4 studies | 28% ± 10% | |
| abnormal cell | 4 studies | 25% ± 3% | |
| goblet cell | 4 studies | 22% ± 5% | |
| mature NK T cell | 3 studies | 18% ± 2% | |
| glomerular endothelial cell | 3 studies | 23% ± 2% | |
| neuron | 3 studies | 34% ± 11% | |
| tissue-resident macrophage | 3 studies | 32% ± 10% | |
| lymphocyte | 3 studies | 25% ± 4% | |
| germinal center B cell | 3 studies | 26% ± 5% | |
| intermediate monocyte | 3 studies | 39% ± 20% | |
| myofibroblast cell | 3 studies | 18% ± 2% | |
| enteroendocrine cell | 3 studies | 23% ± 2% | |
| adventitial cell | 3 studies | 24% ± 4% | |
| gamma-delta T cell | 3 studies | 21% ± 2% | |
| group 3 innate lymphoid cell | 3 studies | 24% ± 3% | |
| mesothelial cell | 3 studies | 33% ± 10% | |
| hematopoietic stem cell | 3 studies | 19% ± 3% | |
| astrocyte | 3 studies | 34% ± 22% | |
| interneuron | 3 studies | 42% ± 19% | |
| kidney loop of Henle epithelial cell | 3 studies | 18% ± 4% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| lung | 11 studies | 23% ± 5% | |
| brain | 9 studies | 30% ± 17% | |
| peripheral blood | 8 studies | 24% ± 8% | |
| liver | 4 studies | 25% ± 8% | |
| bone marrow | 3 studies | 18% ± 3% | |
| intestine | 3 studies | 20% ± 6% | |
| adipose | 3 studies | 28% ± 7% | |
| kidney | 3 studies | 20% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 2996.77 | 1445 / 1445 | 100% | 30.98 | 183 / 183 |
| lung | 100% | 3600.40 | 578 / 578 | 99% | 36.53 | 1149 / 1155 |
| kidney | 100% | 2373.96 | 89 / 89 | 99% | 61.29 | 896 / 901 |
| bladder | 100% | 2807.76 | 21 / 21 | 98% | 30.13 | 494 / 504 |
| prostate | 99% | 1150.65 | 242 / 245 | 98% | 22.80 | 493 / 502 |
| intestine | 100% | 2372.55 | 966 / 966 | 95% | 30.21 | 503 / 527 |
| breast | 100% | 2923.68 | 459 / 459 | 91% | 20.91 | 1020 / 1118 |
| adrenal gland | 100% | 3400.07 | 258 / 258 | 90% | 25.27 | 206 / 230 |
| skin | 99% | 1625.91 | 1783 / 1809 | 91% | 33.69 | 429 / 472 |
| thymus | 97% | 931.40 | 633 / 653 | 88% | 13.03 | 535 / 605 |
| stomach | 82% | 1423.38 | 294 / 359 | 98% | 30.16 | 281 / 286 |
| uterus | 86% | 813.24 | 147 / 170 | 90% | 21.45 | 413 / 459 |
| ovary | 99% | 1742.38 | 179 / 180 | 73% | 11.70 | 316 / 430 |
| brain | 83% | 1189.03 | 2202 / 2642 | 84% | 22.02 | 591 / 705 |
| pancreas | 60% | 383.88 | 196 / 328 | 98% | 41.93 | 175 / 178 |
| liver | 46% | 300.41 | 103 / 226 | 70% | 11.14 | 283 / 406 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 56.22 | 29 / 29 |
| spleen | 100% | 3358.97 | 241 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 7.31 | 1 / 1 |
| adipose | 100% | 2973.26 | 1201 / 1204 | 0% | 0 | 0 / 0 |
| peripheral blood | 100% | 6274.66 | 926 / 929 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 96% | 21.66 | 43 / 45 |
| blood vessel | 92% | 1659.76 | 1226 / 1335 | 0% | 0 | 0 / 0 |
| muscle | 82% | 685.54 | 657 / 803 | 0% | 0 | 0 / 0 |
| heart | 47% | 347.51 | 405 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 5% | 0.39 | 4 / 80 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0007165 | Biological process | signal transduction |
| GO_0008285 | Biological process | negative regulation of cell population proliferation |
| GO_0042113 | Biological process | B cell activation |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0005829 | Cellular component | cytosol |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0005515 | Molecular function | protein binding |
| Gene name | SKAP2 |
| Protein name | Src kinase associated phosphoprotein 2 Src kinase-associated phosphoprotein 2 (Pyk2/RAFTK-associated protein) (Retinoic acid-induced protein 70) (SKAP55 homolog) (SKAP-55HOM) (SKAP-HOM) (Src family-associated phosphoprotein 2) (Src kinase-associated phosphoprotein 55-related protein) (Src-associated adapter protein with PH and SH3 domains) |
| Synonyms | PRAP RA70 SCAP2 SKAP55R SAPS |
| Description | FUNCTION: May be involved in B-cell and macrophage adhesion processes. In B-cells, may act by coupling the B-cell receptor (BCR) to integrin activation. May play a role in src signaling pathway. . |
| Accessions | C9JQ17 ENST00000345317.7 O75563 ENST00000432747.1 |