Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 19 studies | 37% ± 16% | |
macrophage | 18 studies | 41% ± 21% | |
astrocyte | 16 studies | 49% ± 18% | |
oligodendrocyte | 16 studies | 44% ± 16% | |
B cell | 14 studies | 32% ± 16% | |
oligodendrocyte precursor cell | 14 studies | 43% ± 17% | |
glutamatergic neuron | 12 studies | 65% ± 27% | |
microglial cell | 12 studies | 45% ± 19% | |
myeloid cell | 11 studies | 32% ± 14% | |
non-classical monocyte | 10 studies | 29% ± 12% | |
GABAergic neuron | 10 studies | 64% ± 23% | |
mast cell | 10 studies | 43% ± 16% | |
dendritic cell | 9 studies | 43% ± 20% | |
ciliated cell | 9 studies | 28% ± 14% | |
epithelial cell | 9 studies | 41% ± 22% | |
monocyte | 8 studies | 49% ± 23% | |
naive B cell | 8 studies | 25% ± 6% | |
basal cell | 8 studies | 41% ± 23% | |
fibroblast | 8 studies | 28% ± 6% | |
smooth muscle cell | 8 studies | 32% ± 10% | |
adipocyte | 7 studies | 21% ± 3% | |
endothelial cell of lymphatic vessel | 7 studies | 30% ± 9% | |
classical monocyte | 6 studies | 26% ± 7% | |
interneuron | 6 studies | 56% ± 30% | |
Mueller cell | 6 studies | 50% ± 24% | |
T cell | 6 studies | 32% ± 10% | |
club cell | 6 studies | 35% ± 16% | |
neuron | 5 studies | 50% ± 22% | |
retina horizontal cell | 5 studies | 38% ± 19% | |
type I pneumocyte | 5 studies | 56% ± 10% | |
type II pneumocyte | 5 studies | 51% ± 8% | |
pericyte | 4 studies | 18% ± 2% | |
glial cell | 4 studies | 30% ± 9% | |
memory B cell | 4 studies | 20% ± 5% | |
CD16-negative, CD56-bright natural killer cell, human | 4 studies | 24% ± 7% | |
CD4-positive, alpha-beta T cell | 4 studies | 26% ± 6% | |
mesothelial cell | 4 studies | 31% ± 8% | |
respiratory goblet cell | 4 studies | 40% ± 14% | |
abnormal cell | 4 studies | 29% ± 17% | |
hepatic stellate cell | 3 studies | 40% ± 14% | |
progenitor cell | 3 studies | 22% ± 5% | |
CD8-positive, alpha-beta T cell | 3 studies | 23% ± 4% | |
amacrine cell | 3 studies | 44% ± 18% | |
retinal cone cell | 3 studies | 23% ± 10% | |
conventional dendritic cell | 3 studies | 30% ± 10% | |
endothelial cell of vascular tree | 3 studies | 24% ± 8% | |
cholangiocyte | 3 studies | 59% ± 10% | |
hepatocyte | 3 studies | 67% ± 21% | |
neural progenitor cell | 3 studies | 38% ± 15% | |
connective tissue cell | 3 studies | 36% ± 19% | |
ependymal cell | 3 studies | 73% ± 12% | |
neutrophil | 3 studies | 39% ± 13% | |
alveolar macrophage | 3 studies | 48% ± 9% | |
myofibroblast cell | 3 studies | 42% ± 19% | |
natural killer cell | 3 studies | 32% ± 5% | |
lymphocyte | 3 studies | 40% ± 8% | |
leukocyte | 3 studies | 47% ± 18% | |
transit amplifying cell | 3 studies | 44% ± 35% | |
granule cell | 3 studies | 66% ± 21% | |
mucus secreting cell | 3 studies | 43% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3486.28 | 1443 / 1445 | 100% | 20.86 | 183 / 183 |
intestine | 100% | 4020.39 | 965 / 966 | 100% | 14.30 | 525 / 527 |
brain | 100% | 8402.61 | 2633 / 2642 | 100% | 19.37 | 703 / 705 |
stomach | 100% | 3250.07 | 358 / 359 | 100% | 14.84 | 285 / 286 |
thymus | 100% | 4912.10 | 653 / 653 | 99% | 17.62 | 601 / 605 |
bladder | 100% | 2687.43 | 21 / 21 | 99% | 11.85 | 500 / 504 |
lung | 99% | 3991.12 | 574 / 578 | 99% | 13.55 | 1145 / 1155 |
adrenal gland | 100% | 6057.21 | 258 / 258 | 98% | 12.68 | 225 / 230 |
uterus | 100% | 2528.91 | 170 / 170 | 98% | 11.70 | 449 / 459 |
kidney | 100% | 3417.39 | 89 / 89 | 98% | 16.85 | 881 / 901 |
prostate | 100% | 2927.51 | 244 / 245 | 98% | 8.58 | 491 / 502 |
pancreas | 97% | 2301.60 | 318 / 328 | 99% | 17.18 | 177 / 178 |
breast | 96% | 2603.51 | 440 / 459 | 99% | 12.78 | 1107 / 1118 |
liver | 100% | 2330.93 | 225 / 226 | 91% | 6.74 | 370 / 406 |
ovary | 89% | 1483.36 | 161 / 180 | 99% | 17.01 | 426 / 430 |
skin | 100% | 4772.96 | 1806 / 1809 | 89% | 8.27 | 418 / 472 |
blood vessel | 100% | 5975.78 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 7556.71 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 11.91 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.80 | 1 / 1 |
lymph node | 0% | 0 | 0 / 0 | 97% | 13.27 | 28 / 29 |
peripheral blood | 96% | 5343.18 | 895 / 929 | 0% | 0 | 0 / 0 |
adipose | 96% | 2195.96 | 1151 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 41% | 2.01 | 33 / 80 |
heart | 17% | 219.14 | 148 / 861 | 0% | 0 | 0 / 0 |
muscle | 8% | 91.29 | 64 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0051056 | Biological process | regulation of small GTPase mediated signal transduction |
GO_0030036 | Biological process | actin cytoskeleton organization |
GO_0048167 | Biological process | regulation of synaptic plasticity |
GO_0048013 | Biological process | ephrin receptor signaling pathway |
GO_0061001 | Biological process | regulation of dendritic spine morphogenesis |
GO_0043087 | Biological process | regulation of GTPase activity |
GO_0090630 | Biological process | activation of GTPase activity |
GO_0008150 | Biological process | biological_process |
GO_0050770 | Biological process | regulation of axonogenesis |
GO_0014069 | Cellular component | postsynaptic density |
GO_0015629 | Cellular component | actin cytoskeleton |
GO_0043197 | Cellular component | dendritic spine |
GO_0005886 | Cellular component | plasma membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0046875 | Molecular function | ephrin receptor binding |
GO_0005515 | Molecular function | protein binding |
GO_0003674 | Molecular function | molecular_function |
GO_0005096 | Molecular function | GTPase activator activity |
Gene name | SIPA1L1 |
Protein name | SIPA1L1 protein Signal-induced proliferation-associated 1-like protein 1 (SIPA1-like protein 1) (High-risk human papilloma viruses E6 oncoproteins targeted protein 1) (E6-targeted protein 1) Signal induced proliferation associated 1 like 1 |
Synonyms | E6TP1 KIAA0440 |
Description | FUNCTION: Stimulates the GTPase activity of RAP2A. Promotes reorganization of the actin cytoskeleton and recruits DLG4 to F-actin. Contributes to the regulation of dendritic spine morphogenesis (By similarity). . |
Accessions | ENST00000537413.5 ENST00000555818.5 [O43166-1] ENST00000555066.1 H0YJY2 ENST00000381232.8 [O43166-2] A6H8W6 ENST00000358550.6 [O43166-3] G3V4Z3 F5GYF8 ENST00000557151.5 O43166 |