Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| endothelial cell | 17 studies | 28% ± 10% | |
| fibroblast | 15 studies | 28% ± 8% | |
| astrocyte | 14 studies | 33% ± 17% | |
| plasma cell | 13 studies | 37% ± 12% | |
| macrophage | 12 studies | 26% ± 9% | |
| oligodendrocyte precursor cell | 11 studies | 33% ± 15% | |
| oligodendrocyte | 11 studies | 29% ± 12% | |
| glutamatergic neuron | 10 studies | 44% ± 24% | |
| microglial cell | 10 studies | 25% ± 9% | |
| adipocyte | 10 studies | 42% ± 8% | |
| GABAergic neuron | 9 studies | 41% ± 22% | |
| epithelial cell | 9 studies | 31% ± 13% | |
| ciliated cell | 9 studies | 28% ± 5% | |
| smooth muscle cell | 8 studies | 23% ± 8% | |
| myeloid cell | 7 studies | 26% ± 8% | |
| type II pneumocyte | 7 studies | 36% ± 10% | |
| retinal cone cell | 6 studies | 32% ± 11% | |
| dendritic cell | 6 studies | 25% ± 8% | |
| type I pneumocyte | 6 studies | 27% ± 5% | |
| goblet cell | 6 studies | 28% ± 13% | |
| club cell | 6 studies | 28% ± 7% | |
| mast cell | 5 studies | 25% ± 4% | |
| cardiac muscle cell | 5 studies | 31% ± 7% | |
| hepatocyte | 5 studies | 44% ± 18% | |
| pericyte | 5 studies | 23% ± 5% | |
| basal cell | 5 studies | 32% ± 8% | |
| interneuron | 5 studies | 46% ± 25% | |
| connective tissue cell | 4 studies | 30% ± 14% | |
| neuron | 4 studies | 41% ± 18% | |
| retinal pigment epithelial cell | 4 studies | 32% ± 17% | |
| mesothelial cell | 4 studies | 26% ± 7% | |
| lymphocyte | 4 studies | 17% ± 2% | |
| endothelial cell of lymphatic vessel | 4 studies | 20% ± 2% | |
| respiratory goblet cell | 4 studies | 33% ± 10% | |
| monocyte | 4 studies | 28% ± 8% | |
| classical monocyte | 3 studies | 23% ± 5% | |
| conventional dendritic cell | 3 studies | 22% ± 4% | |
| hematopoietic precursor cell | 3 studies | 26% ± 6% | |
| non-classical monocyte | 3 studies | 22% ± 7% | |
| GABAergic interneuron | 3 studies | 23% ± 2% | |
| mononuclear phagocyte | 3 studies | 20% ± 3% | |
| retina horizontal cell | 3 studies | 22% ± 3% | |
| retinal rod cell | 3 studies | 27% ± 11% | |
| abnormal cell | 3 studies | 30% ± 15% | |
| endothelial cell of vascular tree | 3 studies | 21% ± 6% | |
| muscle cell | 3 studies | 36% ± 10% | |
| ependymal cell | 3 studies | 37% ± 18% | |
| megakaryocyte-erythroid progenitor cell | 3 studies | 28% ± 11% | |
| adventitial cell | 3 studies | 18% ± 1% | |
| alveolar macrophage | 3 studies | 30% ± 5% | |
| transit amplifying cell | 3 studies | 26% ± 13% | |
| mucus secreting cell | 3 studies | 25% ± 9% | |
| IgA plasma cell | 3 studies | 28% ± 9% | |
| IgG plasma cell | 3 studies | 22% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| liver | 100% | 2938.03 | 226 / 226 | 100% | 73.72 | 406 / 406 |
| pancreas | 100% | 2789.45 | 328 / 328 | 100% | 39.96 | 178 / 178 |
| thymus | 100% | 2805.68 | 653 / 653 | 100% | 63.98 | 605 / 605 |
| uterus | 100% | 1749.44 | 170 / 170 | 100% | 36.56 | 459 / 459 |
| prostate | 100% | 1966.04 | 245 / 245 | 100% | 76.40 | 501 / 502 |
| kidney | 100% | 1747.87 | 89 / 89 | 100% | 38.82 | 899 / 901 |
| stomach | 100% | 1827.06 | 359 / 359 | 100% | 26.67 | 285 / 286 |
| skin | 100% | 2329.19 | 1807 / 1809 | 100% | 41.09 | 470 / 472 |
| lung | 100% | 1994.99 | 576 / 578 | 100% | 33.83 | 1151 / 1155 |
| bladder | 100% | 1806.33 | 21 / 21 | 99% | 35.34 | 500 / 504 |
| breast | 100% | 1842.77 | 459 / 459 | 99% | 43.53 | 1109 / 1118 |
| adrenal gland | 100% | 4029.94 | 258 / 258 | 99% | 49.22 | 228 / 230 |
| intestine | 100% | 1578.90 | 966 / 966 | 98% | 32.88 | 517 / 527 |
| esophagus | 100% | 1351.80 | 1444 / 1445 | 97% | 16.18 | 177 / 183 |
| ovary | 100% | 1547.48 | 180 / 180 | 96% | 18.35 | 411 / 430 |
| brain | 88% | 761.20 | 2324 / 2642 | 99% | 22.12 | 701 / 705 |
| adipose | 100% | 1974.61 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 100% | 48.42 | 80 / 80 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 34.65 | 29 / 29 |
| spleen | 100% | 1546.61 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 31.56 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 21.52 | 1 / 1 |
| blood vessel | 100% | 2114.92 | 1334 / 1335 | 0% | 0 | 0 / 0 |
| muscle | 100% | 1850.25 | 802 / 803 | 0% | 0 | 0 / 0 |
| heart | 97% | 1606.88 | 835 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 94% | 1193.67 | 877 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0006457 | Biological process | protein folding |
| GO_0006886 | Biological process | intracellular protein transport |
| GO_0006613 | Biological process | cotranslational protein targeting to membrane |
| GO_0005615 | Cellular component | extracellular space |
| GO_0005788 | Cellular component | endoplasmic reticulum lumen |
| GO_0005783 | Cellular component | endoplasmic reticulum |
| GO_0042802 | Molecular function | identical protein binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0000774 | Molecular function | adenyl-nucleotide exchange factor activity |
| GO_0051082 | Molecular function | unfolded protein binding |
| Gene name | SIL1 |
| Protein name | Nucleotide exchange factor SIL1 SIL1 nucleotide exchange factor Nucleotide exchange factor SIL1 (BiP-associated protein) (BAP) |
| Synonyms | UNQ545/PRO836 |
| Description | FUNCTION: Required for protein translocation and folding in the endoplasmic reticulum (ER). Functions as a nucleotide exchange factor for the ER lumenal chaperone HSPA5. . FUNCTION: Required for protein translocation and folding in the endoplasmic reticulum (ER). Functions as a nucleotide exchange factor for the ER lumenal chaperone HSPA5. . FUNCTION: Required for protein translocation and folding in the endoplasmic reticulum (ER). Functions as a nucleotide exchange factor for the ER lumenal chaperone HSPA5. . FUNCTION: Required for protein translocation and folding in the endoplasmic reticulum (ER). Functions as a nucleotide exchange factor for the ER lumenal chaperone HSPA5. . FUNCTION: Required for protein translocation and folding in the endoplasmic reticulum (ER). Functions as a nucleotide exchange factor for the ER lumenal chaperone HSPA5. . FUNCTION: Required for protein translocation and folding in the endoplasmic reticulum (ER). Functions as a nucleotide exchange factor for the ER lumenal chaperone HSPA5. . |
| Accessions | ENST00000507002.5 Q9H173 A0RZB6 ENST00000509534.5 D6R940 ENST00000505945.1 ENST00000394817.7 ENST00000505830.5 D6RIU8 ENST00000265195.9 D6RBP7 ENST00000505353.1 ENST00000508639.5 ENST00000513453.5 A0A0S2Z5K6 D6REA1 A0RZG6 D6RG16 D6RAI3 A0A0S2Z6B4 |