Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 28 studies | 37% ± 19% | |
endothelial cell | 26 studies | 38% ± 16% | |
oligodendrocyte | 12 studies | 58% ± 17% | |
endothelial cell of lymphatic vessel | 11 studies | 41% ± 21% | |
ciliated cell | 11 studies | 28% ± 13% | |
oligodendrocyte precursor cell | 11 studies | 64% ± 19% | |
smooth muscle cell | 10 studies | 32% ± 12% | |
adipocyte | 10 studies | 56% ± 21% | |
astrocyte | 9 studies | 37% ± 12% | |
epithelial cell | 9 studies | 40% ± 23% | |
glutamatergic neuron | 8 studies | 39% ± 20% | |
GABAergic neuron | 7 studies | 37% ± 16% | |
pericyte | 7 studies | 38% ± 13% | |
cardiac muscle cell | 6 studies | 59% ± 22% | |
basal cell | 6 studies | 33% ± 23% | |
hepatocyte | 5 studies | 59% ± 25% | |
neuron | 5 studies | 43% ± 24% | |
microglial cell | 5 studies | 32% ± 24% | |
interneuron | 5 studies | 35% ± 16% | |
capillary endothelial cell | 5 studies | 32% ± 19% | |
adventitial cell | 5 studies | 30% ± 14% | |
type I pneumocyte | 5 studies | 41% ± 7% | |
type II pneumocyte | 5 studies | 32% ± 5% | |
squamous epithelial cell | 4 studies | 36% ± 20% | |
cholangiocyte | 4 studies | 49% ± 26% | |
glial cell | 4 studies | 36% ± 14% | |
granule cell | 4 studies | 25% ± 8% | |
macrophage | 4 studies | 24% ± 14% | |
Mueller cell | 4 studies | 57% ± 19% | |
retinal cone cell | 4 studies | 34% ± 16% | |
retinal rod cell | 4 studies | 33% ± 5% | |
club cell | 4 studies | 31% ± 7% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 64% ± 6% | |
endothelial cell of artery | 3 studies | 18% ± 2% | |
vein endothelial cell | 3 studies | 33% ± 12% | |
glycinergic amacrine cell | 3 studies | 17% ± 1% | |
endothelial cell of vascular tree | 3 studies | 41% ± 6% | |
retinal pigment epithelial cell | 3 studies | 33% ± 12% | |
connective tissue cell | 3 studies | 23% ± 9% | |
intestinal crypt stem cell | 3 studies | 20% ± 2% | |
myofibroblast cell | 3 studies | 42% ± 9% | |
respiratory goblet cell | 3 studies | 38% ± 10% | |
muscle cell | 3 studies | 29% ± 11% | |
mucus secreting cell | 3 studies | 31% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 7797.68 | 1443 / 1445 | 99% | 41.31 | 182 / 183 |
intestine | 100% | 8720.32 | 964 / 966 | 99% | 53.51 | 524 / 527 |
lung | 100% | 11503.17 | 578 / 578 | 99% | 29.74 | 1142 / 1155 |
prostate | 98% | 6059.67 | 241 / 245 | 100% | 32.51 | 500 / 502 |
breast | 100% | 10890.42 | 459 / 459 | 97% | 28.79 | 1083 / 1118 |
bladder | 100% | 8280.38 | 21 / 21 | 95% | 27.56 | 480 / 504 |
uterus | 100% | 6586.72 | 170 / 170 | 91% | 17.36 | 419 / 459 |
thymus | 100% | 6209.18 | 650 / 653 | 91% | 28.98 | 552 / 605 |
liver | 95% | 2942.82 | 214 / 226 | 95% | 23.87 | 386 / 406 |
ovary | 100% | 10000.51 | 180 / 180 | 89% | 15.18 | 384 / 430 |
kidney | 96% | 3281.66 | 85 / 89 | 92% | 23.81 | 833 / 901 |
stomach | 84% | 4496.85 | 301 / 359 | 99% | 51.12 | 282 / 286 |
skin | 100% | 8346.42 | 1807 / 1809 | 76% | 14.66 | 359 / 472 |
adrenal gland | 91% | 3173.70 | 236 / 258 | 68% | 7.91 | 156 / 230 |
pancreas | 57% | 1284.11 | 186 / 328 | 98% | 36.28 | 175 / 178 |
brain | 34% | 706.80 | 903 / 2642 | 93% | 18.00 | 659 / 705 |
adipose | 100% | 14540.74 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 8791.92 | 1335 / 1335 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 17.78 | 1 / 1 |
heart | 95% | 6889.69 | 820 / 861 | 0% | 0 | 0 / 0 |
muscle | 93% | 2862.26 | 743 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 89% | 18.72 | 40 / 45 |
eye | 0% | 0 | 0 / 0 | 61% | 10.55 | 49 / 80 |
spleen | 25% | 503.36 | 60 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 5.37 | 3 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0022604 | Biological process | regulation of cell morphogenesis |
GO_0007010 | Biological process | cytoskeleton organization |
GO_0051044 | Biological process | positive regulation of membrane protein ectodomain proteolysis |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005886 | Cellular component | plasma membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | SH3D19 |
Protein name | SH3 domain-containing protein 19 (ADAM-binding protein Eve-1) (EEN-binding protein) (EBP) SH3D19 protein SH3 domain containing 19 |
Synonyms | |
Description | FUNCTION: May play a role in regulating A disintegrin and metalloproteases (ADAMs) in the signaling of EGFR-ligand shedding. May be involved in suppression of Ras-induced cellular transformation and Ras-mediated activation of ELK1. Plays a role in the regulation of cell morphology and cytoskeletal organization. . |
Accessions | ENST00000709914.1 [Q5HYK7-2] A0A494C1M0 ENST00000652233.1 ENST00000709926.1 [Q5HYK7-1] ENST00000514152.5 [Q5HYK7-2] ENST00000709917.1 [Q5HYK7-2] ENST00000709915.1 [Q5HYK7-1] Q5HYK7 ENST00000409252.6 [Q5HYK7-1] ENST00000604030.7 A0A0U1RQN2 ENST00000462257.1 Q6PJX8 ENST00000427414.2 [Q5HYK7-3] ENST00000709920.1 [Q5HYK7-3] A0A0U1RQE4 ENST00000409598.8 [Q5HYK7-2] |