Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 42 studies | 36% ± 13% | |
pericyte | 25 studies | 49% ± 18% | |
smooth muscle cell | 22 studies | 28% ± 10% | |
endothelial cell | 16 studies | 30% ± 11% | |
connective tissue cell | 14 studies | 42% ± 19% | |
macrophage | 13 studies | 28% ± 9% | |
glutamatergic neuron | 13 studies | 54% ± 25% | |
myofibroblast cell | 13 studies | 35% ± 13% | |
adipocyte | 10 studies | 54% ± 12% | |
astrocyte | 10 studies | 38% ± 10% | |
mast cell | 9 studies | 26% ± 8% | |
GABAergic neuron | 9 studies | 49% ± 22% | |
alveolar macrophage | 8 studies | 32% ± 7% | |
endothelial cell of lymphatic vessel | 8 studies | 22% ± 6% | |
neuron | 7 studies | 32% ± 11% | |
epithelial cell | 7 studies | 41% ± 16% | |
plasmacytoid dendritic cell | 6 studies | 28% ± 14% | |
ciliated cell | 6 studies | 27% ± 14% | |
myeloid cell | 6 studies | 24% ± 6% | |
interneuron | 6 studies | 44% ± 16% | |
natural killer cell | 5 studies | 20% ± 5% | |
adventitial cell | 5 studies | 24% ± 8% | |
oligodendrocyte precursor cell | 5 studies | 19% ± 3% | |
CD16-negative, CD56-bright natural killer cell, human | 4 studies | 20% ± 5% | |
podocyte | 4 studies | 58% ± 13% | |
basal cell | 4 studies | 24% ± 11% | |
amacrine cell | 4 studies | 24% ± 7% | |
retina horizontal cell | 4 studies | 21% ± 2% | |
lymphocyte | 4 studies | 24% ± 11% | |
innate lymphoid cell | 4 studies | 21% ± 2% | |
dendritic cell | 4 studies | 31% ± 11% | |
T cell | 3 studies | 18% ± 3% | |
hematopoietic precursor cell | 3 studies | 32% ± 12% | |
progenitor cell | 3 studies | 45% ± 22% | |
kidney distal convoluted tubule epithelial cell | 3 studies | 21% ± 4% | |
abnormal cell | 3 studies | 27% ± 7% | |
neural crest cell | 3 studies | 37% ± 14% | |
extravillous trophoblast | 3 studies | 42% ± 8% | |
platelet | 3 studies | 19% ± 4% | |
mononuclear phagocyte | 3 studies | 22% ± 4% | |
GABAergic amacrine cell | 3 studies | 24% ± 3% | |
gamma-delta T cell | 3 studies | 27% ± 6% | |
granulocyte monocyte progenitor cell | 3 studies | 16% ± 0% | |
hematopoietic stem cell | 3 studies | 26% ± 3% | |
megakaryocyte | 3 studies | 49% ± 13% | |
megakaryocyte-erythroid progenitor cell | 3 studies | 44% ± 8% | |
enteroendocrine cell | 3 studies | 20% ± 6% | |
goblet cell | 3 studies | 19% ± 2% | |
group 3 innate lymphoid cell | 3 studies | 27% ± 12% | |
granule cell | 3 studies | 29% ± 6% | |
hepatocyte | 3 studies | 32% ± 13% | |
renal principal cell | 3 studies | 28% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 6258.35 | 2639 / 2642 | 100% | 63.25 | 704 / 705 |
esophagus | 100% | 3851.84 | 1442 / 1445 | 99% | 45.29 | 182 / 183 |
intestine | 100% | 4871.23 | 966 / 966 | 99% | 40.46 | 523 / 527 |
lung | 100% | 8508.21 | 578 / 578 | 99% | 41.60 | 1145 / 1155 |
breast | 100% | 9667.57 | 459 / 459 | 99% | 51.88 | 1107 / 1118 |
kidney | 100% | 6629.26 | 89 / 89 | 99% | 54.69 | 890 / 901 |
bladder | 100% | 4789.38 | 21 / 21 | 98% | 39.44 | 496 / 504 |
stomach | 99% | 3344.72 | 354 / 359 | 99% | 44.29 | 284 / 286 |
prostate | 99% | 4481.04 | 243 / 245 | 96% | 23.51 | 481 / 502 |
thymus | 100% | 4006.51 | 650 / 653 | 95% | 30.43 | 577 / 605 |
uterus | 100% | 5561.64 | 170 / 170 | 94% | 32.23 | 432 / 459 |
ovary | 98% | 3648.45 | 177 / 180 | 91% | 21.31 | 390 / 430 |
skin | 93% | 12917.42 | 1679 / 1809 | 95% | 53.96 | 450 / 472 |
pancreas | 90% | 2163.92 | 296 / 328 | 98% | 52.61 | 174 / 178 |
liver | 96% | 2429.81 | 217 / 226 | 82% | 16.37 | 331 / 406 |
adrenal gland | 83% | 1750.90 | 215 / 258 | 80% | 16.37 | 183 / 230 |
adipose | 100% | 12503.90 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 3390.17 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 19.35 | 1 / 1 |
blood vessel | 100% | 7079.46 | 1333 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 26.31 | 44 / 45 |
heart | 92% | 2951.58 | 788 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 86% | 19.88 | 69 / 80 |
lymph node | 0% | 0 | 0 / 0 | 86% | 24.45 | 25 / 29 |
muscle | 55% | 1066.67 | 439 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 23% | 2856.22 | 214 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0050807 | Biological process | regulation of synapse organization |
GO_0008104 | Biological process | protein localization |
GO_0061640 | Biological process | cytoskeleton-dependent cytokinesis |
GO_0098978 | Cellular component | glutamatergic synapse |
GO_0098982 | Cellular component | GABA-ergic synapse |
GO_0001725 | Cellular component | stress fiber |
GO_0030424 | Cellular component | axon |
GO_0032153 | Cellular component | cell division site |
GO_0015630 | Cellular component | microtubule cytoskeleton |
GO_0043197 | Cellular component | dendritic spine |
GO_0099629 | Cellular component | postsynaptic specialization of symmetric synapse |
GO_0031105 | Cellular component | septin complex |
GO_0005940 | Cellular component | septin ring |
GO_0005525 | Molecular function | GTP binding |
GO_0003924 | Molecular function | GTPase activity |
GO_0005515 | Molecular function | protein binding |
GO_0060090 | Molecular function | molecular adaptor activity |
Gene name | SEPTIN11 |
Protein name | Septin 11 Septin-11 Septin |
Synonyms | SEPT11 hCG_24410 |
Description | FUNCTION: Filament-forming cytoskeletal GTPase. May play a role in cytokinesis (Potential). May play a role in the cytoarchitecture of neurons, including dendritic arborization and dendritic spines, and in GABAergic synaptic connectivity (By similarity). During Listeria monocytogenes infection, not required for the bacterial entry process, but restricts its efficacy. . FUNCTION: Filament-forming cytoskeletal GTPase. . FUNCTION: Filament-forming cytoskeletal GTPase. . |
Accessions | ENST00000502584.5 ENST00000510641.5 D6RDU5 ENST00000505788.5 H0Y9G8 ENST00000512778.1 ENST00000506731.5 ENST00000510515.5 [Q9NVA2-2] D6RER5 D6RDP1 ENST00000502401.1 H0Y961 Q9NVA2 D6R9Y6 ENST00000504637.5 ENST00000264893.11 [Q9NVA2-1] D6RGI3 |