Name | Number of supported studies | Average coverage | |
---|---|---|---|
hematopoietic precursor cell | 4 studies | 18% ± 2% | |
epithelial cell | 4 studies | 32% ± 9% | |
B cell | 4 studies | 21% ± 5% | |
naive thymus-derived CD4-positive, alpha-beta T cell | 4 studies | 17% ± 2% | |
naive thymus-derived CD8-positive, alpha-beta T cell | 4 studies | 24% ± 4% | |
regulatory T cell | 4 studies | 23% ± 9% | |
CD4-positive, alpha-beta T cell | 4 studies | 26% ± 8% | |
type I pneumocyte | 3 studies | 21% ± 1% | |
dendritic cell | 3 studies | 19% ± 3% | |
hematopoietic stem cell | 3 studies | 35% ± 14% | |
megakaryocyte-erythroid progenitor cell | 3 studies | 39% ± 13% | |
type II pneumocyte | 3 studies | 22% ± 3% | |
erythroblast | 3 studies | 24% ± 5% | |
CD4-positive, alpha-beta memory T cell | 3 studies | 19% ± 1% | |
memory B cell | 3 studies | 21% ± 6% | |
CD8-positive, alpha-beta T cell | 3 studies | 32% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 1816.82 | 180 / 180 | 100% | 47.15 | 430 / 430 |
uterus | 100% | 1383.04 | 170 / 170 | 100% | 78.45 | 459 / 459 |
bladder | 100% | 2087.57 | 21 / 21 | 100% | 76.42 | 502 / 504 |
intestine | 100% | 1574.11 | 965 / 966 | 100% | 68.90 | 525 / 527 |
breast | 100% | 1567.05 | 459 / 459 | 99% | 54.59 | 1112 / 1118 |
esophagus | 99% | 1818.58 | 1434 / 1445 | 100% | 43.79 | 183 / 183 |
lung | 100% | 1609.44 | 576 / 578 | 100% | 58.23 | 1150 / 1155 |
skin | 100% | 2581.05 | 1808 / 1809 | 99% | 40.60 | 466 / 472 |
prostate | 100% | 1337.09 | 245 / 245 | 98% | 33.95 | 494 / 502 |
stomach | 99% | 1121.15 | 354 / 359 | 99% | 56.71 | 283 / 286 |
thymus | 100% | 1403.94 | 653 / 653 | 95% | 29.23 | 574 / 605 |
pancreas | 96% | 1114.02 | 316 / 328 | 94% | 35.04 | 168 / 178 |
liver | 100% | 1491.76 | 225 / 226 | 81% | 19.69 | 329 / 406 |
kidney | 96% | 913.82 | 85 / 89 | 83% | 18.89 | 745 / 901 |
brain | 70% | 359.75 | 1859 / 2642 | 79% | 21.56 | 559 / 705 |
adrenal gland | 100% | 1324.05 | 258 / 258 | 32% | 7.63 | 73 / 230 |
lymph node | 0% | 0 | 0 / 0 | 100% | 63.25 | 29 / 29 |
spleen | 100% | 1950.72 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 74.08 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 84.27 | 1 / 1 |
adipose | 100% | 1469.20 | 1202 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 26.81 | 75 / 80 |
blood vessel | 94% | 662.41 | 1249 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 92% | 2110.31 | 859 / 929 | 0% | 0 | 0 / 0 |
muscle | 91% | 887.82 | 727 / 803 | 0% | 0 | 0 / 0 |
heart | 71% | 450.60 | 615 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007059 | Biological process | chromosome segregation |
GO_0007052 | Biological process | mitotic spindle organization |
GO_0051301 | Biological process | cell division |
GO_0051225 | Biological process | spindle assembly |
GO_0007084 | Biological process | mitotic nuclear membrane reassembly |
GO_0016032 | Biological process | viral process |
GO_0000082 | Biological process | G1/S transition of mitotic cell cycle |
GO_0007088 | Biological process | regulation of mitotic nuclear division |
GO_0032991 | Cellular component | protein-containing complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005737 | Cellular component | cytoplasm |
GO_0005694 | Cellular component | chromosome |
GO_0000794 | Cellular component | condensed nuclear chromosome |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0005085 | Molecular function | guanyl-nucleotide exchange factor activity |
GO_0042393 | Molecular function | histone binding |
GO_0003682 | Molecular function | chromatin binding |
GO_0031492 | Molecular function | nucleosomal DNA binding |
GO_0043199 | Molecular function | sulfate binding |
GO_0031267 | Molecular function | small GTPase binding |
GO_0031491 | Molecular function | nucleosome binding |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0005515 | Molecular function | protein binding |
Gene name | RCC1 |
Protein name | Regulator of chromosome condensation (Cell cycle regulatory protein) (Chromosome condensation protein 1) Regulator of chromosome condensation Regulator of chromosome condensation 1 |
Synonyms | hCG_27809 CHC1 |
Description | FUNCTION: Guanine-nucleotide releasing factor that promotes the exchange of Ran-bound GDP by GTP, and thereby plays an important role in RAN-mediated functions in nuclear import and mitosis . Contributes to the generation of high levels of chromosome-associated, GTP-bound RAN, which is important for mitotic spindle assembly and normal progress through mitosis . Via its role in maintaining high levels of GTP-bound RAN in the nucleus, contributes to the release of cargo proteins from importins after nuclear import . Involved in the regulation of onset of chromosome condensation in the S phase . Binds both to the nucleosomes and double-stranded DNA . . |
Accessions | ENST00000373831.7 [P18754-2] ENST00000434290.6 ENST00000373833.10 [P18754-1] Q5T081 P18754 ENST00000683442.1 [P18754-1] ENST00000430407.1 C9JRH2 ENST00000419074.5 ENST00000649185.1 [P18754-2] A0A0S2Z404 ENST00000427469.5 M0R1Q8 ENST00000398958.6 [P18754-1] C9JQZ4 ENST00000373832.5 [P18754-1] A0A0S2Z3I4 ENST00000486790.2 C9JW69 ENST00000411533.5 C9JMJ4 C9J3R0 |