Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 19 studies | 29% ± 11% | |
B cell | 14 studies | 22% ± 7% | |
microglial cell | 11 studies | 28% ± 12% | |
memory B cell | 9 studies | 17% ± 2% | |
naive B cell | 8 studies | 17% ± 2% | |
fibroblast | 8 studies | 23% ± 9% | |
retinal rod cell | 7 studies | 30% ± 10% | |
dendritic cell | 7 studies | 25% ± 10% | |
natural killer cell | 6 studies | 17% ± 2% | |
macrophage | 6 studies | 25% ± 9% | |
endothelial cell of lymphatic vessel | 5 studies | 24% ± 6% | |
astrocyte | 5 studies | 29% ± 8% | |
epithelial cell | 4 studies | 27% ± 7% | |
mast cell | 4 studies | 21% ± 7% | |
retinal bipolar neuron | 4 studies | 23% ± 5% | |
retina horizontal cell | 4 studies | 23% ± 8% | |
endothelial cell of vascular tree | 4 studies | 26% ± 15% | |
GABAergic neuron | 4 studies | 28% ± 13% | |
pericyte | 4 studies | 20% ± 5% | |
CD16-positive, CD56-dim natural killer cell, human | 3 studies | 16% ± 1% | |
CD4-positive, alpha-beta T cell | 3 studies | 17% ± 1% | |
glomerular endothelial cell | 3 studies | 17% ± 0% | |
myeloid cell | 3 studies | 16% ± 1% | |
plasma cell | 3 studies | 29% ± 4% | |
adipocyte | 3 studies | 20% ± 4% | |
mononuclear phagocyte | 3 studies | 17% ± 1% | |
lymphocyte | 3 studies | 21% ± 4% | |
ON-bipolar cell | 3 studies | 25% ± 11% | |
rod bipolar cell | 3 studies | 54% ± 11% | |
germinal center B cell | 3 studies | 25% ± 4% | |
glutamatergic neuron | 3 studies | 46% ± 17% | |
oligodendrocyte precursor cell | 3 studies | 27% ± 5% | |
connective tissue cell | 3 studies | 18% ± 2% | |
smooth muscle cell | 3 studies | 18% ± 1% | |
melanocyte | 3 studies | 52% ± 26% | |
transit amplifying cell | 3 studies | 33% ± 21% | |
interneuron | 3 studies | 29% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 3301.55 | 578 / 578 | 99% | 14.79 | 1140 / 1155 |
skin | 100% | 3278.52 | 1809 / 1809 | 99% | 43.03 | 465 / 472 |
thymus | 100% | 2757.91 | 653 / 653 | 98% | 13.23 | 593 / 605 |
ovary | 100% | 3045.70 | 180 / 180 | 98% | 11.49 | 420 / 430 |
bladder | 100% | 2654.48 | 21 / 21 | 97% | 11.94 | 488 / 504 |
esophagus | 100% | 2266.01 | 1444 / 1445 | 97% | 14.41 | 177 / 183 |
uterus | 100% | 3633.14 | 170 / 170 | 96% | 13.07 | 439 / 459 |
breast | 100% | 3334.64 | 459 / 459 | 94% | 14.05 | 1056 / 1118 |
intestine | 100% | 3659.34 | 966 / 966 | 94% | 10.11 | 496 / 527 |
prostate | 100% | 2581.12 | 245 / 245 | 94% | 9.34 | 470 / 502 |
kidney | 100% | 1790.85 | 89 / 89 | 93% | 13.40 | 841 / 901 |
stomach | 100% | 1888.94 | 359 / 359 | 92% | 10.89 | 264 / 286 |
pancreas | 94% | 911.25 | 308 / 328 | 96% | 11.49 | 170 / 178 |
brain | 86% | 888.55 | 2280 / 2642 | 100% | 18.98 | 704 / 705 |
adrenal gland | 100% | 4963.67 | 258 / 258 | 63% | 8.90 | 146 / 230 |
liver | 96% | 854.01 | 218 / 226 | 65% | 4.03 | 264 / 406 |
blood vessel | 100% | 3195.74 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 28.91 | 29 / 29 |
muscle | 100% | 2387.72 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 4081.45 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 100% | 3474.59 | 1203 / 1204 | 0% | 0 | 0 / 0 |
heart | 98% | 1492.27 | 845 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 13.46 | 44 / 45 |
eye | 0% | 0 | 0 / 0 | 88% | 11.78 | 70 / 80 |
peripheral blood | 77% | 1526.89 | 719 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0030148 | Biological process | sphingolipid biosynthetic process |
GO_0035556 | Biological process | intracellular signal transduction |
GO_0006468 | Biological process | protein phosphorylation |
GO_0007200 | Biological process | phospholipase C-activating G protein-coupled receptor signaling pathway |
GO_0007205 | Biological process | protein kinase C-activating G protein-coupled receptor signaling pathway |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005886 | Cellular component | plasma membrane |
GO_0004674 | Molecular function | protein serine/threonine kinase activity |
GO_0004697 | Molecular function | diacylglycerol-dependent serine/threonine kinase activity |
GO_0005515 | Molecular function | protein binding |
GO_0106310 | Molecular function | protein serine kinase activity |
GO_0046872 | Molecular function | metal ion binding |
GO_0005524 | Molecular function | ATP binding |
GO_0016301 | Molecular function | kinase activity |
Gene name | PRKD3 |
Protein name | Serine/threonine-protein kinase D3 (EC 2.7.11.13) (Protein kinase C nu type) (Protein kinase EPK2) (nPKC-nu) Serine/threonine-protein kinase (EC 2.7.11.13) Protein kinase D3 |
Synonyms | PRKCN EPK2 |
Description | FUNCTION: Converts transient diacylglycerol (DAG) signals into prolonged physiological effects, downstream of PKC. Involved in resistance to oxidative stress (By similarity). . |
Accessions | ENST00000379066.5 [O94806-1] ENST00000443187.1 O94806 A0A1S5UZ27 H0Y5M6 ENST00000452104.5 ENST00000443977.1 C9JKP8 ENST00000234179.8 [O94806-1] H7C172 |