PCNX1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell	23 studies	32% ± 11%	Explore
astrocyte	14 studies	43% ± 18%	Explore
glutamatergic neuron	12 studies	50% ± 24%	Explore
GABAergic neuron	11 studies	46% ± 24%	Explore
fibroblast	11 studies	35% ± 17%	Explore
microglial cell	11 studies	38% ± 13%	Explore
T cell	10 studies	37% ± 15%	Explore
oligodendrocyte precursor cell	10 studies	44% ± 17%	Explore
mast cell	10 studies	35% ± 8%	Explore
oligodendrocyte	10 studies	38% ± 11%	Explore
macrophage	10 studies	39% ± 19%	Explore
monocyte	9 studies	35% ± 16%	Explore
adipocyte	9 studies	43% ± 12%	Explore
myeloid cell	8 studies	26% ± 10%	Explore
natural killer cell	7 studies	30% ± 11%	Explore
CD8-positive, alpha-beta T cell	7 studies	32% ± 12%	Explore
CD4-positive, alpha-beta T cell	6 studies	42% ± 21%	Explore
classical monocyte	6 studies	25% ± 4%	Explore
neuron	6 studies	41% ± 20%	Explore
epithelial cell	6 studies	34% ± 13%	Explore
dendritic cell	6 studies	39% ± 8%	Explore
pericyte	6 studies	33% ± 10%	Explore
smooth muscle cell	6 studies	31% ± 8%	Explore
B cell	5 studies	27% ± 9%	Explore
retina horizontal cell	5 studies	33% ± 19%	Explore
regulatory T cell	5 studies	36% ± 18%	Explore
endothelial cell of lymphatic vessel	5 studies	35% ± 14%	Explore
interneuron	5 studies	61% ± 22%	Explore
neutrophil	4 studies	23% ± 7%	Explore
CD16-negative, CD56-bright natural killer cell, human	4 studies	34% ± 17%	Explore
effector memory CD8-positive, alpha-beta T cell	4 studies	42% ± 22%	Explore
plasma cell	4 studies	31% ± 2%	Explore
retinal pigment epithelial cell	4 studies	36% ± 24%	Explore
cardiac muscle cell	4 studies	38% ± 7%	Explore
mesothelial cell	4 studies	31% ± 12%	Explore
ciliated cell	4 studies	24% ± 8%	Explore
lymphocyte	4 studies	53% ± 24%	Explore
amacrine cell	4 studies	33% ± 13%	Explore
retinal rod cell	4 studies	29% ± 9%	Explore
basal cell	4 studies	32% ± 22%	Explore
type II pneumocyte	4 studies	22% ± 7%	Explore
hematopoietic precursor cell	3 studies	36% ± 19%	Explore
CD16-positive, CD56-dim natural killer cell, human	3 studies	26% ± 11%	Explore
endothelial cell of artery	3 studies	25% ± 7%	Explore
mononuclear phagocyte	3 studies	30% ± 14%	Explore
mucosal invariant T cell	3 studies	39% ± 19%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	3 studies	44% ± 14%	Explore
non-classical monocyte	3 studies	29% ± 2%	Explore
vein endothelial cell	3 studies	40% ± 20%	Explore
GABAergic amacrine cell	3 studies	41% ± 17%	Explore
Mueller cell	3 studies	41% ± 15%	Explore
glycinergic amacrine cell	3 studies	34% ± 12%	Explore
retinal cone cell	3 studies	28% ± 18%	Explore
CD8-positive, alpha-beta memory T cell	3 studies	18% ± 2%	Explore
mature NK T cell	3 studies	30% ± 18%	Explore
endothelial cell of vascular tree	3 studies	40% ± 24%	Explore
ependymal cell	3 studies	47% ± 18%	Explore
alveolar macrophage	3 studies	50% ± 12%	Explore
club cell	3 studies	24% ± 7%	Explore
leukocyte	3 studies	60% ± 22%	Explore
granule cell	3 studies	37% ± 10%	Explore
mural cell	3 studies	37% ± 14%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	15 studies	41% ± 22%	Explore
lung	4 studies	33% ± 10%	Explore
heart	4 studies	29% ± 7%	Explore
eye	4 studies	47% ± 14%	Explore
peripheral blood	3 studies	24% ± 1%	Explore
adipose	3 studies	36% ± 8%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	4330.76	1444 / 1445	100%	16.38	183 / 183
lung	100%	6287.08	578 / 578	100%	11.53	1154 / 1155
breast	100%	5875.55	459 / 459	100%	12.98	1115 / 1118
prostate	100%	4133.32	244 / 245	100%	11.20	502 / 502
thymus	100%	4304.49	653 / 653	100%	13.60	602 / 605
uterus	100%	5575.81	170 / 170	99%	8.94	456 / 459
bladder	100%	5292.95	21 / 21	99%	8.58	500 / 504
adrenal gland	100%	9755.36	258 / 258	99%	14.49	228 / 230
kidney	100%	3071.93	89 / 89	99%	12.03	891 / 901
intestine	100%	5475.82	966 / 966	99%	8.72	521 / 527
stomach	100%	3497.64	359 / 359	99%	10.58	282 / 286
brain	99%	3163.75	2604 / 2642	100%	13.55	705 / 705
skin	100%	4632.31	1809 / 1809	98%	11.34	461 / 472
ovary	100%	7986.03	180 / 180	97%	6.61	419 / 430
liver	100%	2165.29	226 / 226	96%	5.98	388 / 406
pancreas	96%	1854.73	314 / 328	99%	11.13	176 / 178
adipose	100%	5906.53	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	11.70	29 / 29
muscle	100%	4819.50	803 / 803	0%	0	0 / 0
spleen	100%	6250.70	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	10.30	45 / 45
ureter	0%	0	0 / 0	100%	3.44	1 / 1
blood vessel	100%	5255.68	1334 / 1335	0%	0	0 / 0
peripheral blood	99%	9915.41	922 / 929	0%	0	0 / 0
heart	97%	3501.19	837 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	94%	6.33	75 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0