NCAM1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
astrocyte	21 studies	69% ± 19%	Explore
oligodendrocyte	15 studies	80% ± 14%	Explore
oligodendrocyte precursor cell	14 studies	82% ± 14%	Explore
CD16-negative, CD56-bright natural killer cell, human	14 studies	31% ± 11%	Explore
natural killer cell	13 studies	28% ± 9%	Explore
glutamatergic neuron	11 studies	81% ± 15%	Explore
GABAergic neuron	10 studies	78% ± 17%	Explore
fibroblast	9 studies	25% ± 7%	Explore
neuron	9 studies	71% ± 15%	Explore
amacrine cell	8 studies	69% ± 16%	Explore
smooth muscle cell	7 studies	34% ± 14%	Explore
interneuron	7 studies	84% ± 13%	Explore
retinal ganglion cell	7 studies	80% ± 15%	Explore
CD16-positive, CD56-dim natural killer cell, human	7 studies	20% ± 6%	Explore
myofibroblast cell	6 studies	24% ± 4%	Explore
endothelial cell	6 studies	51% ± 25%	Explore
retina horizontal cell	6 studies	76% ± 15%	Explore
cardiac muscle cell	6 studies	65% ± 21%	Explore
Mueller cell	6 studies	81% ± 16%	Explore
progenitor cell	5 studies	32% ± 18%	Explore
connective tissue cell	5 studies	35% ± 21%	Explore
retinal bipolar neuron	5 studies	45% ± 26%	Explore
glial cell	5 studies	48% ± 12%	Explore
microglial cell	5 studies	41% ± 15%	Explore
retinal cone cell	5 studies	43% ± 22%	Explore
retinal rod cell	5 studies	52% ± 24%	Explore
granule cell	4 studies	69% ± 13%	Explore
lymphocyte	4 studies	22% ± 6%	Explore
OFF-bipolar cell	4 studies	66% ± 19%	Explore
ON-bipolar cell	4 studies	63% ± 23%	Explore
mature NK T cell	4 studies	17% ± 1%	Explore
differentiation-committed oligodendrocyte precursor	3 studies	80% ± 2%	Explore
GABAergic interneuron	3 studies	83% ± 4%	Explore
GABAergic amacrine cell	3 studies	83% ± 9%	Explore
glycinergic amacrine cell	3 studies	79% ± 11%	Explore
rod bipolar cell	3 studies	50% ± 11%	Explore
Schwann cell	3 studies	58% ± 20%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	18 studies	67% ± 22%	Explore
eye	10 studies	43% ± 23%	Explore
heart	5 studies	28% ± 11%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	21485.28	2642 / 2642	100%	201.88	702 / 705
adrenal gland	98%	10307.28	252 / 258	95%	64.68	218 / 230
ovary	99%	10965.97	179 / 180	41%	7.12	175 / 430
thymus	92%	5777.19	602 / 653	43%	8.20	262 / 605
uterus	98%	16427.62	166 / 170	18%	9.40	83 / 459
bladder	90%	8452.33	19 / 21	7%	1.59	37 / 504
heart	95%	16898.54	820 / 861	0%	0	0 / 0
intestine	77%	7407.96	748 / 966	3%	0.39	17 / 527
prostate	60%	3298.82	148 / 245	16%	1.47	80 / 502
stomach	65%	4390.08	235 / 359	7%	1.54	21 / 286
esophagus	62%	5501.13	890 / 1445	7%	0.78	12 / 183
skin	0%	11.62	6 / 1809	37%	8.30	174 / 472
muscle	37%	1624.67	294 / 803	0%	0	0 / 0
blood vessel	22%	855.29	299 / 1335	0%	0	0 / 0
pancreas	1%	39.76	4 / 328	19%	3.89	34 / 178
kidney	1%	45.76	1 / 89	15%	2.88	131 / 901
breast	3%	81.10	14 / 459	6%	0.92	68 / 1118
lung	0%	19.15	1 / 578	7%	1.32	82 / 1155
adipose	6%	161.33	67 / 1204	0%	0	0 / 0
liver	0%	0	0 / 226	5%	0.88	19 / 406
tonsil	0%	0	0 / 0	4%	0.41	2 / 45
peripheral blood	4%	114.94	38 / 929	0%	0	0 / 0
eye	0%	0	0 / 0	4%	1.03	3 / 80
lymph node	0%	0	0 / 0	3%	2.12	1 / 29
spleen	3%	84.27	8 / 241	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1