Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 25 studies | 38% ± 15% | |
astrocyte | 18 studies | 45% ± 20% | |
fibroblast | 14 studies | 39% ± 15% | |
oligodendrocyte precursor cell | 12 studies | 47% ± 16% | |
oligodendrocyte | 12 studies | 38% ± 13% | |
macrophage | 12 studies | 31% ± 14% | |
glutamatergic neuron | 11 studies | 62% ± 24% | |
pericyte | 11 studies | 36% ± 15% | |
smooth muscle cell | 11 studies | 34% ± 11% | |
type I pneumocyte | 10 studies | 46% ± 22% | |
GABAergic neuron | 10 studies | 56% ± 23% | |
microglial cell | 10 studies | 39% ± 20% | |
epithelial cell | 9 studies | 34% ± 16% | |
adipocyte | 9 studies | 37% ± 11% | |
retinal rod cell | 8 studies | 62% ± 25% | |
type II pneumocyte | 7 studies | 50% ± 17% | |
neuron | 7 studies | 44% ± 14% | |
retinal ganglion cell | 7 studies | 44% ± 25% | |
dendritic cell | 7 studies | 28% ± 13% | |
basal cell | 7 studies | 38% ± 21% | |
endothelial cell of lymphatic vessel | 7 studies | 41% ± 11% | |
retinal cone cell | 6 studies | 38% ± 18% | |
ciliated cell | 6 studies | 39% ± 16% | |
club cell | 6 studies | 40% ± 17% | |
interneuron | 5 studies | 65% ± 23% | |
cardiac muscle cell | 5 studies | 40% ± 11% | |
mast cell | 5 studies | 22% ± 7% | |
mesothelial cell | 5 studies | 39% ± 16% | |
Mueller cell | 5 studies | 35% ± 20% | |
T cell | 5 studies | 28% ± 15% | |
connective tissue cell | 5 studies | 26% ± 9% | |
granule cell | 4 studies | 44% ± 7% | |
OFF-bipolar cell | 4 studies | 36% ± 18% | |
ON-bipolar cell | 4 studies | 34% ± 16% | |
amacrine cell | 4 studies | 36% ± 21% | |
retina horizontal cell | 4 studies | 41% ± 20% | |
endothelial cell of vascular tree | 4 studies | 35% ± 18% | |
kidney loop of Henle epithelial cell | 4 studies | 48% ± 26% | |
glial cell | 3 studies | 30% ± 11% | |
vein endothelial cell | 3 studies | 40% ± 25% | |
lymphocyte | 3 studies | 29% ± 10% | |
retinal bipolar neuron | 3 studies | 24% ± 8% | |
GABAergic amacrine cell | 3 studies | 42% ± 16% | |
glycinergic amacrine cell | 3 studies | 38% ± 11% | |
rod bipolar cell | 3 studies | 36% ± 19% | |
myeloid cell | 3 studies | 27% ± 7% | |
B cell | 3 studies | 24% ± 7% | |
alveolar macrophage | 3 studies | 30% ± 8% | |
capillary endothelial cell | 3 studies | 27% ± 5% | |
monocyte | 3 studies | 30% ± 6% | |
myofibroblast cell | 3 studies | 43% ± 19% | |
respiratory goblet cell | 3 studies | 42% ± 18% | |
muscle cell | 3 studies | 46% ± 24% | |
goblet cell | 3 studies | 30% ± 20% | |
transit amplifying cell | 3 studies | 38% ± 30% | |
renal principal cell | 3 studies | 40% ± 19% | |
mucus secreting cell | 3 studies | 31% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3638.93 | 1444 / 1445 | 99% | 7.29 | 181 / 183 |
brain | 99% | 2275.05 | 2617 / 2642 | 96% | 6.94 | 679 / 705 |
kidney | 100% | 2794.09 | 89 / 89 | 95% | 12.48 | 859 / 901 |
breast | 100% | 3336.99 | 459 / 459 | 94% | 7.58 | 1050 / 1118 |
lung | 100% | 3034.02 | 577 / 578 | 93% | 5.10 | 1069 / 1155 |
prostate | 100% | 2938.51 | 245 / 245 | 91% | 6.15 | 456 / 502 |
thymus | 100% | 3933.76 | 653 / 653 | 90% | 6.20 | 542 / 605 |
skin | 100% | 3117.38 | 1808 / 1809 | 88% | 5.58 | 417 / 472 |
ovary | 100% | 3268.39 | 180 / 180 | 87% | 3.78 | 374 / 430 |
stomach | 100% | 2194.68 | 359 / 359 | 83% | 4.09 | 238 / 286 |
uterus | 100% | 3896.10 | 170 / 170 | 78% | 3.74 | 357 / 459 |
intestine | 100% | 3003.10 | 966 / 966 | 72% | 2.96 | 382 / 527 |
bladder | 100% | 3270.52 | 21 / 21 | 71% | 3.04 | 359 / 504 |
adrenal gland | 100% | 1284.13 | 257 / 258 | 70% | 3.35 | 162 / 230 |
pancreas | 72% | 603.38 | 235 / 328 | 82% | 3.45 | 146 / 178 |
adipose | 100% | 3091.09 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3679.84 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 2134.87 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1945.57 | 241 / 241 | 0% | 0 | 0 / 0 |
heart | 96% | 1655.32 | 828 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 78% | 3.28 | 35 / 45 |
lymph node | 0% | 0 | 0 / 0 | 76% | 3.47 | 22 / 29 |
liver | 38% | 240.09 | 85 / 226 | 10% | 0.34 | 40 / 406 |
eye | 0% | 0 | 0 / 0 | 46% | 1.83 | 37 / 80 |
peripheral blood | 27% | 734.73 | 252 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007601 | Biological process | visual perception |
GO_0051056 | Biological process | regulation of small GTPase mediated signal transduction |
GO_0045198 | Biological process | establishment of epithelial cell apical/basal polarity |
GO_0035556 | Biological process | intracellular signal transduction |
GO_0034329 | Biological process | cell junction assembly |
GO_0150011 | Biological process | regulation of neuron projection arborization |
GO_0005884 | Cellular component | actin filament |
GO_0005829 | Cellular component | cytosol |
GO_0045202 | Cellular component | synapse |
GO_0044295 | Cellular component | axonal growth cone |
GO_0016020 | Cellular component | membrane |
GO_0016461 | Cellular component | unconventional myosin complex |
GO_0000146 | Molecular function | microfilament motor activity |
GO_0051015 | Molecular function | actin filament binding |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0005524 | Molecular function | ATP binding |
GO_0005096 | Molecular function | GTPase activator activity |
Gene name | MYO9A |
Protein name | Myosin IXA Unconventional myosin-IXa (Unconventional myosin-9a) MYO9A |
Synonyms | MYR7 |
Description | FUNCTION: Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Regulates Rho by stimulating it's GTPase activity in neurons. Required for the regulation of neurite branching and motor neuron axon guidance (By similarity). . |
Accessions | ENST00000568042.5 H3BRD5 H3BV44 ENST00000566885.5 H3BU05 H3BMS3 ENST00000568438.1 H3BSU8 ENST00000564931.1 H3BTL9 ENST00000564571.5 H3BMM1 H3BP49 ENST00000356056.10 [B2RTY4-1] ENST00000569314.1 ENST00000568481.1 A0A2X0SFG5 B2RTY4 ENST00000561618.5 |