LUC7L | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
endothelial cell	24 studies	26% ± 10%	Explore
fibroblast	18 studies	23% ± 8%	Explore
astrocyte	14 studies	30% ± 12%	Explore
pericyte	13 studies	21% ± 8%	Explore
oligodendrocyte precursor cell	12 studies	30% ± 13%	Explore
smooth muscle cell	11 studies	20% ± 4%	Explore
glutamatergic neuron	10 studies	39% ± 24%	Explore
natural killer cell	9 studies	18% ± 3%	Explore
microglial cell	9 studies	24% ± 7%	Explore
oligodendrocyte	9 studies	28% ± 7%	Explore
B cell	8 studies	20% ± 3%	Explore
naive B cell	8 studies	20% ± 3%	Explore
macrophage	8 studies	27% ± 7%	Explore
epithelial cell	8 studies	33% ± 15%	Explore
myofibroblast cell	7 studies	23% ± 6%	Explore
GABAergic neuron	7 studies	43% ± 19%	Explore
T cell	6 studies	19% ± 3%	Explore
neuron	6 studies	38% ± 12%	Explore
interneuron	6 studies	41% ± 22%	Explore
adipocyte	6 studies	25% ± 5%	Explore
CD16-negative, CD56-bright natural killer cell, human	5 studies	19% ± 1%	Explore
myeloid cell	5 studies	22% ± 4%	Explore
type I pneumocyte	5 studies	21% ± 6%	Explore
ciliated cell	5 studies	29% ± 8%	Explore
endothelial cell of lymphatic vessel	5 studies	25% ± 8%	Explore
CD16-positive, CD56-dim natural killer cell, human	4 studies	20% ± 3%	Explore
connective tissue cell	4 studies	19% ± 3%	Explore
retinal ganglion cell	4 studies	26% ± 3%	Explore
retinal cone cell	4 studies	22% ± 4%	Explore
lymphocyte	4 studies	29% ± 6%	Explore
basal cell	4 studies	31% ± 12%	Explore
gamma-delta T cell	4 studies	29% ± 15%	Explore
type II pneumocyte	4 studies	22% ± 5%	Explore
abnormal cell	4 studies	27% ± 10%	Explore
goblet cell	4 studies	28% ± 19%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	3 studies	17% ± 1%	Explore
effector memory CD8-positive, alpha-beta T cell	3 studies	20% ± 2%	Explore
GABAergic interneuron	3 studies	28% ± 6%	Explore
granule cell	3 studies	23% ± 2%	Explore
progenitor cell	3 studies	25% ± 3%	Explore
mast cell	3 studies	27% ± 6%	Explore
capillary endothelial cell	3 studies	21% ± 1%	Explore
immature B cell	3 studies	24% ± 8%	Explore
retina horizontal cell	3 studies	23% ± 4%	Explore
retinal rod cell	3 studies	17% ± 2%	Explore
Mueller cell	3 studies	21% ± 3%	Explore
endothelial cell of vascular tree	3 studies	25% ± 12%	Explore
CD8-positive, alpha-beta T cell	3 studies	19% ± 4%	Explore
CD8-positive, alpha-beta memory T cell	3 studies	18% ± 3%	Explore
muscle cell	3 studies	29% ± 18%	Explore
dendritic cell	3 studies	29% ± 6%	Explore
ependymal cell	3 studies	34% ± 11%	Explore
club cell	3 studies	24% ± 6%	Explore
monocyte	3 studies	20% ± 3%	Explore
plasmacytoid dendritic cell	3 studies	24% ± 9%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
brain	14 studies	33% ± 17%	Explore
lung	5 studies	23% ± 4%	Explore
eye	5 studies	23% ± 12%	Explore
peripheral blood	4 studies	21% ± 6%	Explore
intestine	3 studies	21% ± 4%	Explore
adipose	3 studies	21% ± 2%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	100%	9062.20	245 / 245	100%	21.04	502 / 502
uterus	100%	8379.62	170 / 170	100%	27.46	459 / 459
brain	100%	4934.46	2637 / 2642	100%	44.98	705 / 705
thymus	100%	11121.22	653 / 653	100%	31.43	603 / 605
breast	100%	5309.88	459 / 459	100%	25.77	1114 / 1118
adrenal gland	100%	5679.43	258 / 258	100%	25.53	229 / 230
bladder	100%	4834.38	21 / 21	99%	24.01	499 / 504
lung	100%	5386.97	578 / 578	99%	19.38	1143 / 1155
esophagus	100%	4501.89	1445 / 1445	99%	13.45	181 / 183
skin	100%	3319.70	1808 / 1809	99%	21.39	467 / 472
pancreas	100%	3730.88	328 / 328	99%	23.78	176 / 178
intestine	100%	5713.42	966 / 966	99%	17.93	520 / 527
kidney	100%	5688.08	89 / 89	97%	21.70	871 / 901
ovary	100%	7313.56	180 / 180	96%	15.60	412 / 430
stomach	100%	4120.83	359 / 359	95%	15.27	272 / 286
liver	100%	2753.09	225 / 226	83%	9.76	337 / 406
adipose	100%	4341.57	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	29.98	29 / 29
spleen	100%	7898.22	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	16.72	45 / 45
ureter	0%	0	0 / 0	100%	21.03	1 / 1
blood vessel	100%	3776.10	1331 / 1335	0%	0	0 / 0
heart	99%	2430.75	850 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	96%	18.46	77 / 80
muscle	93%	1683.47	749 / 803	0%	0	0 / 0
peripheral blood	80%	1664.90	746 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0006376	Biological process	mRNA splice site recognition
GO_0045843	Biological process	negative regulation of striated muscle tissue development
GO_0071004	Cellular component	U2-type prespliceosome
GO_0005685	Cellular component	U1 snRNP
GO_0050733	Molecular function	RS domain binding
GO_0042802	Molecular function	identical protein binding
GO_0005515	Molecular function	protein binding
GO_0003729	Molecular function	mRNA binding

IV. Literature review

[source]

Gene name	LUC7L
Protein name	LUC7-like (S. cerevisiae) (Putative RNA-binding protein Luc7-like 1) Putative RNA-binding protein Luc7-like 1 (Putative SR protein LUC7B1) (SR+89) LUC7 like LUC7 like (LUC7-like (S. cerevisiae))
Synonyms	hCG_22425 LUC7L1 LA16c-OS12.1-015 LA16c-OS12.1-007 LA16c-OS12.1-001 LA16c-OS12.1-016 LA16c-OS12.1-020 LA16c-OS12.1-012
Description	FUNCTION: May bind to RNA via its Arg/Ser-rich domain. .
Accessions	F2Z322 B8ZZ08 ENST00000397780.5 ENST00000293872.13 [Q9NQ29-1] ENST00000418978.5 A8MYV2 B8ZZ10 Q9NQ29 ENST00000429378.5 ENST00000629543.2 B8ZZ12 ENST00000442701.1 ENST00000426094.5 B8ZZ09 H7C2U4 F8WBC1 ENST00000443357.5 ENST00000430864.5 ENST00000397783.5 [Q9NQ29-2] ENST00000337351.8 [Q9NQ29-2] ENST00000419516.5 Q1W6G4 ENST00000428363.1

LUC7L report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review