Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 19 studies | 27% ± 11% | |
mast cell | 15 studies | 38% ± 14% | |
oligodendrocyte | 15 studies | 56% ± 18% | |
microglial cell | 10 studies | 28% ± 10% | |
macrophage | 10 studies | 32% ± 13% | |
epithelial cell | 8 studies | 34% ± 21% | |
oligodendrocyte precursor cell | 7 studies | 28% ± 11% | |
T cell | 6 studies | 21% ± 4% | |
natural killer cell | 6 studies | 21% ± 2% | |
respiratory goblet cell | 6 studies | 36% ± 13% | |
ciliated cell | 6 studies | 28% ± 11% | |
astrocyte | 6 studies | 31% ± 13% | |
club cell | 5 studies | 27% ± 11% | |
dendritic cell | 5 studies | 23% ± 5% | |
myeloid cell | 5 studies | 30% ± 8% | |
endothelial cell of lymphatic vessel | 5 studies | 23% ± 7% | |
squamous epithelial cell | 4 studies | 36% ± 17% | |
plasma cell | 4 studies | 32% ± 7% | |
fibroblast | 4 studies | 26% ± 8% | |
lymphocyte | 4 studies | 32% ± 15% | |
retinal cone cell | 4 studies | 22% ± 6% | |
GABAergic neuron | 4 studies | 39% ± 10% | |
glutamatergic neuron | 4 studies | 35% ± 12% | |
goblet cell | 4 studies | 40% ± 31% | |
monocyte | 4 studies | 30% ± 6% | |
type I pneumocyte | 4 studies | 24% ± 7% | |
type II pneumocyte | 4 studies | 22% ± 6% | |
neuron | 4 studies | 40% ± 22% | |
ionocyte | 3 studies | 25% ± 8% | |
secretory cell | 3 studies | 27% ± 6% | |
CD4-positive, alpha-beta T cell | 3 studies | 25% ± 5% | |
CD8-positive, alpha-beta T cell | 3 studies | 20% ± 5% | |
effector memory CD8-positive, alpha-beta T cell | 3 studies | 25% ± 2% | |
glial cell | 3 studies | 27% ± 6% | |
CD8-positive, alpha-beta memory T cell | 3 studies | 19% ± 3% | |
hepatocyte | 3 studies | 46% ± 27% | |
alveolar macrophage | 3 studies | 32% ± 7% | |
basal cell | 3 studies | 33% ± 9% | |
interneuron | 3 studies | 40% ± 19% | |
renal principal cell | 3 studies | 26% ± 7% | |
mucus secreting cell | 3 studies | 31% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 3412.24 | 245 / 245 | 100% | 30.14 | 501 / 502 |
intestine | 100% | 4253.89 | 966 / 966 | 98% | 21.94 | 519 / 527 |
stomach | 100% | 4793.81 | 359 / 359 | 98% | 25.56 | 281 / 286 |
pancreas | 99% | 2050.66 | 324 / 328 | 97% | 30.07 | 172 / 178 |
kidney | 100% | 4471.92 | 89 / 89 | 95% | 23.13 | 853 / 901 |
thymus | 100% | 3236.07 | 652 / 653 | 94% | 18.96 | 570 / 605 |
brain | 97% | 2967.71 | 2551 / 2642 | 97% | 15.71 | 683 / 705 |
esophagus | 100% | 2700.67 | 1444 / 1445 | 92% | 22.62 | 168 / 183 |
skin | 96% | 4630.57 | 1730 / 1809 | 96% | 18.05 | 453 / 472 |
breast | 100% | 3118.20 | 459 / 459 | 91% | 24.65 | 1022 / 1118 |
adrenal gland | 100% | 4064.48 | 258 / 258 | 84% | 11.80 | 194 / 230 |
bladder | 100% | 3338.71 | 21 / 21 | 81% | 11.03 | 410 / 504 |
lung | 99% | 3044.52 | 575 / 578 | 82% | 12.95 | 944 / 1155 |
uterus | 100% | 2098.44 | 170 / 170 | 76% | 9.24 | 351 / 459 |
liver | 100% | 1908.95 | 225 / 226 | 65% | 8.41 | 262 / 406 |
ovary | 99% | 2240.17 | 179 / 180 | 56% | 4.14 | 242 / 430 |
spleen | 100% | 3100.08 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.47 | 1 / 1 |
adipose | 100% | 2402.69 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2712.36 | 1333 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 15.01 | 75 / 80 |
heart | 86% | 1065.94 | 740 / 861 | 0% | 0 | 0 / 0 |
muscle | 81% | 890.71 | 651 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 80% | 10.32 | 36 / 45 |
lymph node | 0% | 0 | 0 / 0 | 59% | 5.89 | 17 / 29 |
peripheral blood | 58% | 891.98 | 537 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007165 | Biological process | signal transduction |
GO_0006605 | Biological process | protein targeting |
GO_0007018 | Biological process | microtubule-based movement |
GO_0042110 | Biological process | T cell activation |
GO_0030705 | Biological process | cytoskeleton-dependent intracellular transport |
GO_0050770 | Biological process | regulation of axonogenesis |
GO_0030424 | Cellular component | axon |
GO_0005871 | Cellular component | kinesin complex |
GO_0005874 | Cellular component | microtubule |
GO_0005737 | Cellular component | cytoplasm |
GO_0019901 | Molecular function | protein kinase binding |
GO_0071889 | Molecular function | 14-3-3 protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0003777 | Molecular function | microtubule motor activity |
GO_0008017 | Molecular function | microtubule binding |
GO_0016887 | Molecular function | ATP hydrolysis activity |
GO_0005524 | Molecular function | ATP binding |
Gene name | KIF13B |
Protein name | Kinesin-like protein KIF13B (Kinesin-like protein GAKIN) Kinesin family member 13B Kinesin-like protein |
Synonyms | GAKIN KIAA0639 |
Description | FUNCTION: Involved in reorganization of the cortical cytoskeleton. Regulates axon formation by promoting the formation of extra axons. May be functionally important for the intracellular trafficking of MAGUKs and associated protein complexes. . |
Accessions | E7ERX9 ENST00000521515.1 Q9NQT8 E5RK06 ENST00000523130.1 A0JLQ2 ENST00000524189.6 [Q9NQT8-1] ENST00000522355.5 ENST00000523968.1 F2Z2F9 H0YBA8 |