Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| endothelial cell | 30 studies | 37% ± 15% | |
| astrocyte | 20 studies | 45% ± 19% | |
| fibroblast | 19 studies | 32% ± 12% | |
| macrophage | 15 studies | 39% ± 18% | |
| oligodendrocyte | 15 studies | 47% ± 15% | |
| microglial cell | 15 studies | 47% ± 13% | |
| smooth muscle cell | 15 studies | 26% ± 10% | |
| oligodendrocyte precursor cell | 14 studies | 47% ± 16% | |
| glutamatergic neuron | 12 studies | 64% ± 22% | |
| pericyte | 12 studies | 32% ± 12% | |
| GABAergic neuron | 11 studies | 60% ± 21% | |
| epithelial cell | 11 studies | 38% ± 19% | |
| adipocyte | 10 studies | 44% ± 11% | |
| mast cell | 9 studies | 26% ± 9% | |
| ciliated cell | 9 studies | 33% ± 12% | |
| neuron | 8 studies | 51% ± 17% | |
| myeloid cell | 8 studies | 36% ± 14% | |
| endothelial cell of lymphatic vessel | 8 studies | 37% ± 12% | |
| type I pneumocyte | 8 studies | 38% ± 15% | |
| B cell | 7 studies | 28% ± 10% | |
| dendritic cell | 7 studies | 37% ± 9% | |
| T cell | 7 studies | 29% ± 10% | |
| basal cell | 7 studies | 36% ± 19% | |
| interneuron | 6 studies | 68% ± 21% | |
| retinal ganglion cell | 6 studies | 60% ± 13% | |
| retina horizontal cell | 6 studies | 42% ± 16% | |
| retinal cone cell | 6 studies | 36% ± 10% | |
| myofibroblast cell | 6 studies | 27% ± 12% | |
| type II pneumocyte | 6 studies | 36% ± 9% | |
| natural killer cell | 6 studies | 24% ± 8% | |
| club cell | 6 studies | 34% ± 14% | |
| plasma cell | 5 studies | 29% ± 8% | |
| amacrine cell | 5 studies | 57% ± 12% | |
| retinal rod cell | 5 studies | 37% ± 9% | |
| CD8-positive, alpha-beta T cell | 5 studies | 20% ± 5% | |
| capillary endothelial cell | 5 studies | 25% ± 9% | |
| cardiac muscle cell | 5 studies | 46% ± 10% | |
| mesothelial cell | 5 studies | 36% ± 14% | |
| Mueller cell | 5 studies | 40% ± 14% | |
| regulatory T cell | 5 studies | 20% ± 4% | |
| connective tissue cell | 5 studies | 27% ± 6% | |
| monocyte | 5 studies | 44% ± 11% | |
| goblet cell | 5 studies | 32% ± 25% | |
| secretory cell | 4 studies | 20% ± 5% | |
| non-classical monocyte | 4 studies | 22% ± 4% | |
| granule cell | 4 studies | 49% ± 9% | |
| retinal bipolar neuron | 4 studies | 36% ± 11% | |
| retinal pigment epithelial cell | 4 studies | 43% ± 20% | |
| CD4-positive, alpha-beta T cell | 4 studies | 24% ± 5% | |
| lymphocyte | 4 studies | 33% ± 15% | |
| abnormal cell | 4 studies | 31% ± 18% | |
| endothelial cell of vascular tree | 4 studies | 36% ± 18% | |
| respiratory goblet cell | 4 studies | 42% ± 15% | |
| kidney loop of Henle epithelial cell | 4 studies | 30% ± 9% | |
| renal principal cell | 4 studies | 32% ± 11% | |
| classical monocyte | 3 studies | 21% ± 3% | |
| podocyte | 3 studies | 30% ± 3% | |
| GABAergic interneuron | 3 studies | 64% ± 4% | |
| glial cell | 3 studies | 36% ± 8% | |
| progenitor cell | 3 studies | 35% ± 5% | |
| placental villous trophoblast | 3 studies | 20% ± 3% | |
| platelet | 3 studies | 16% ± 0% | |
| endothelial cell of artery | 3 studies | 21% ± 4% | |
| mononuclear phagocyte | 3 studies | 32% ± 4% | |
| vein endothelial cell | 3 studies | 39% ± 20% | |
| GABAergic amacrine cell | 3 studies | 62% ± 9% | |
| OFF-bipolar cell | 3 studies | 45% ± 3% | |
| ON-bipolar cell | 3 studies | 49% ± 4% | |
| glycinergic amacrine cell | 3 studies | 51% ± 3% | |
| rod bipolar cell | 3 studies | 40% ± 16% | |
| hepatocyte | 3 studies | 59% ± 16% | |
| muscle cell | 3 studies | 43% ± 22% | |
| ependymal cell | 3 studies | 50% ± 17% | |
| enteroendocrine cell | 3 studies | 28% ± 15% | |
| adventitial cell | 3 studies | 25% ± 6% | |
| alveolar macrophage | 3 studies | 53% ± 9% | |
| chondrocyte | 3 studies | 33% ± 4% | |
| leukocyte | 3 studies | 43% ± 10% | |
| transit amplifying cell | 3 studies | 40% ± 34% | |
| plasmacytoid dendritic cell | 3 studies | 20% ± 2% | |
| kidney distal convoluted tubule epithelial cell | 3 studies | 33% ± 11% | |
| renal alpha-intercalated cell | 3 studies | 37% ± 16% | |
| mucus secreting cell | 3 studies | 40% ± 3% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 18 studies | 52% ± 21% | |
| lung | 9 studies | 30% ± 10% | |
| eye | 7 studies | 42% ± 16% | |
| heart | 5 studies | 33% ± 10% | |
| kidney | 4 studies | 32% ± 11% | |
| peripheral blood | 3 studies | 17% ± 1% | |
| liver | 3 studies | 41% ± 14% | |
| intestine | 3 studies | 24% ± 8% | |
| adipose | 3 studies | 38% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 2190.59 | 1445 / 1445 | 100% | 20.49 | 183 / 183 |
| ovary | 100% | 2965.47 | 180 / 180 | 100% | 18.92 | 429 / 430 |
| lung | 100% | 2940.06 | 578 / 578 | 100% | 24.84 | 1151 / 1155 |
| breast | 100% | 2819.25 | 459 / 459 | 99% | 26.92 | 1112 / 1118 |
| stomach | 100% | 2288.32 | 359 / 359 | 99% | 20.71 | 284 / 286 |
| brain | 100% | 4515.99 | 2633 / 2642 | 100% | 29.79 | 702 / 705 |
| prostate | 100% | 2131.70 | 245 / 245 | 99% | 27.34 | 496 / 502 |
| thymus | 100% | 3236.02 | 653 / 653 | 99% | 30.68 | 597 / 605 |
| intestine | 100% | 2810.22 | 966 / 966 | 99% | 21.14 | 520 / 527 |
| kidney | 100% | 2873.40 | 89 / 89 | 98% | 32.40 | 886 / 901 |
| pancreas | 99% | 1499.83 | 326 / 328 | 99% | 24.66 | 176 / 178 |
| adrenal gland | 100% | 4719.07 | 258 / 258 | 98% | 48.95 | 225 / 230 |
| uterus | 100% | 2944.38 | 170 / 170 | 97% | 17.97 | 447 / 459 |
| bladder | 100% | 2475.86 | 21 / 21 | 97% | 18.92 | 487 / 504 |
| skin | 100% | 2783.52 | 1805 / 1809 | 96% | 23.90 | 455 / 472 |
| liver | 100% | 1741.94 | 226 / 226 | 93% | 16.32 | 379 / 406 |
| adipose | 100% | 2785.58 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 4150.28 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| spleen | 100% | 2016.65 | 241 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 5.79 | 1 / 1 |
| muscle | 99% | 1928.88 | 796 / 803 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 98% | 13.90 | 44 / 45 |
| heart | 97% | 2803.60 | 831 / 861 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 90% | 9.48 | 26 / 29 |
| peripheral blood | 82% | 1262.25 | 764 / 929 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 80% | 13.12 | 64 / 80 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0070062 | Cellular component | extracellular exosome |
| GO_0005886 | Cellular component | plasma membrane |
| Gene name | ITFG1 |
| Protein name | Integrin alpha FG-GAP repeat containing 1 T-cell immunomodulatory protein (Protein TIP) (Integrin-alpha FG-GAP repeat-containing protein 1) (Linkin) |
| Synonyms | TIP CDA08 LNKN-1 |
| Description | FUNCTION: Modulator of T-cell function. Has a protective effect in graft versus host disease model (By similarity). . |
| Accessions | I3L1X7 ENST00000565940.6 ENST00000565262.1 H3BQ64 F5GXC5 Q8TB96 H3BUJ1 ENST00000544001.6 ENST00000320640.11 ENST00000563730.1 |