Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| pericyte | 36 studies | 57% ± 18% | |
| smooth muscle cell | 27 studies | 50% ± 20% | |
| non-classical monocyte | 17 studies | 40% ± 17% | |
| fibroblast | 17 studies | 28% ± 12% | |
| endothelial cell | 14 studies | 33% ± 11% | |
| basal cell | 11 studies | 38% ± 17% | |
| endothelial cell of lymphatic vessel | 10 studies | 26% ± 8% | |
| endothelial cell of artery | 8 studies | 35% ± 5% | |
| epithelial cell | 8 studies | 45% ± 13% | |
| ciliated cell | 8 studies | 31% ± 14% | |
| secretory cell | 8 studies | 46% ± 19% | |
| connective tissue cell | 7 studies | 31% ± 13% | |
| type I pneumocyte | 6 studies | 23% ± 6% | |
| club cell | 6 studies | 35% ± 12% | |
| astrocyte | 6 studies | 29% ± 12% | |
| endothelial cell of vascular tree | 6 studies | 19% ± 4% | |
| monocyte | 5 studies | 23% ± 5% | |
| myofibroblast cell | 5 studies | 29% ± 14% | |
| Mueller cell | 5 studies | 33% ± 10% | |
| neuron | 5 studies | 28% ± 11% | |
| respiratory goblet cell | 4 studies | 44% ± 16% | |
| luminal hormone-sensing cell of mammary gland | 4 studies | 39% ± 12% | |
| leukocyte | 4 studies | 29% ± 9% | |
| abnormal cell | 3 studies | 25% ± 6% | |
| neural crest cell | 3 studies | 23% ± 5% | |
| luminal cell of prostate epithelium | 3 studies | 39% ± 5% | |
| muscle cell | 3 studies | 36% ± 11% | |
| GABAergic neuron | 3 studies | 35% ± 13% | |
| glutamatergic neuron | 3 studies | 42% ± 10% | |
| neural progenitor cell | 3 studies | 22% ± 8% | |
| mast cell | 3 studies | 25% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| prostate | 100% | 1323.71 | 244 / 245 | 97% | 54.42 | 489 / 502 |
| esophagus | 99% | 792.64 | 1424 / 1445 | 98% | 66.65 | 180 / 183 |
| uterus | 100% | 885.44 | 170 / 170 | 95% | 44.70 | 438 / 459 |
| bladder | 95% | 980.52 | 20 / 21 | 91% | 52.97 | 458 / 504 |
| brain | 90% | 748.74 | 2385 / 2642 | 93% | 47.52 | 657 / 705 |
| lung | 98% | 910.51 | 568 / 578 | 82% | 23.63 | 949 / 1155 |
| pancreas | 91% | 337.21 | 297 / 328 | 87% | 32.24 | 155 / 178 |
| breast | 99% | 910.92 | 455 / 459 | 78% | 22.70 | 877 / 1118 |
| thymus | 95% | 574.59 | 623 / 653 | 81% | 23.37 | 490 / 605 |
| intestine | 95% | 666.64 | 913 / 966 | 78% | 30.83 | 413 / 527 |
| kidney | 97% | 575.11 | 86 / 89 | 75% | 24.90 | 677 / 901 |
| stomach | 71% | 344.84 | 256 / 359 | 86% | 35.78 | 245 / 286 |
| ovary | 61% | 337.04 | 109 / 180 | 96% | 63.59 | 413 / 430 |
| skin | 71% | 402.71 | 1293 / 1809 | 42% | 8.83 | 197 / 472 |
| ureter | 0% | 0 | 0 / 0 | 100% | 257.81 | 1 / 1 |
| blood vessel | 100% | 1977.05 | 1333 / 1335 | 0% | 0 | 0 / 0 |
| heart | 99% | 1164.47 | 854 / 861 | 0% | 0 | 0 / 0 |
| adipose | 97% | 740.72 | 1168 / 1204 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 96% | 23.15 | 77 / 80 |
| spleen | 96% | 549.31 | 231 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 93% | 24.66 | 42 / 45 |
| liver | 34% | 108.74 | 76 / 226 | 44% | 11.22 | 178 / 406 |
| adrenal gland | 28% | 106.50 | 72 / 258 | 48% | 12.07 | 110 / 230 |
| muscle | 53% | 168.60 | 427 / 803 | 0% | 0 | 0 / 0 |
| peripheral blood | 28% | 130.53 | 260 / 929 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 14% | 2.64 | 4 / 29 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0007399 | Biological process | nervous system development |
| GO_0030154 | Biological process | cell differentiation |
| GO_0009952 | Biological process | anterior/posterior pattern specification |
| GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
| GO_0000785 | Cellular component | chromatin |
| GO_0005634 | Cellular component | nucleus |
| GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| GO_0046983 | Molecular function | protein dimerization activity |
| GO_0005515 | Molecular function | protein binding |
| GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
| Gene name | HES4 |
| Protein name | Transcription factor HES-4 (hHES4) (Class B basic helix-loop-helix protein 42) (bHLHb42) (Hairy and enhancer of split 4) (bHLH factor Hes4) Hes family bHLH transcription factor 4 |
| Synonyms | BHLHB42 |
| Description | FUNCTION: Transcriptional repressor. Binds DNA on N-box motifs: 5'-CACNAG-3' (By similarity). . |
| Accessions | D6REB3 ENST00000428771.6 ENST00000484667.2 Q9HCC6 ENST00000304952.11 E9PB28 |