Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 5 studies | 23% ± 7% | |
fibroblast | 5 studies | 18% ± 1% | |
pericyte | 4 studies | 18% ± 2% | |
GABAergic neuron | 4 studies | 26% ± 9% | |
glutamatergic neuron | 4 studies | 30% ± 12% | |
oligodendrocyte precursor cell | 4 studies | 25% ± 4% | |
neuron | 4 studies | 23% ± 6% | |
CD16-negative, CD56-bright natural killer cell, human | 3 studies | 17% ± 1% | |
CD16-positive, CD56-dim natural killer cell, human | 3 studies | 18% ± 3% | |
smooth muscle cell | 3 studies | 17% ± 1% | |
B cell | 3 studies | 20% ± 2% | |
epithelial cell | 3 studies | 36% ± 1% | |
natural killer cell | 3 studies | 18% ± 2% | |
ciliated cell | 3 studies | 25% ± 2% | |
astrocyte | 3 studies | 20% ± 3% | |
abnormal cell | 3 studies | 20% ± 5% | |
interneuron | 3 studies | 25% ± 13% | |
oligodendrocyte | 3 studies | 23% ± 2% | |
naive B cell | 3 studies | 18% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 4613.85 | 180 / 180 | 100% | 29.39 | 430 / 430 |
prostate | 100% | 3544.81 | 245 / 245 | 100% | 21.28 | 502 / 502 |
brain | 100% | 2816.34 | 2640 / 2642 | 100% | 36.57 | 705 / 705 |
lung | 100% | 2594.34 | 578 / 578 | 100% | 22.75 | 1154 / 1155 |
thymus | 100% | 3138.26 | 653 / 653 | 100% | 28.22 | 604 / 605 |
skin | 100% | 2444.55 | 1809 / 1809 | 100% | 25.07 | 471 / 472 |
uterus | 100% | 4951.52 | 170 / 170 | 100% | 23.16 | 458 / 459 |
intestine | 100% | 3640.15 | 966 / 966 | 100% | 18.91 | 525 / 527 |
breast | 100% | 2941.42 | 459 / 459 | 100% | 25.97 | 1113 / 1118 |
esophagus | 100% | 3670.99 | 1445 / 1445 | 99% | 23.41 | 182 / 183 |
bladder | 100% | 4145.90 | 21 / 21 | 99% | 19.94 | 501 / 504 |
stomach | 100% | 2532.92 | 359 / 359 | 99% | 19.57 | 284 / 286 |
kidney | 100% | 1990.61 | 89 / 89 | 99% | 16.67 | 893 / 901 |
pancreas | 99% | 1428.25 | 326 / 328 | 99% | 17.77 | 177 / 178 |
adrenal gland | 100% | 2524.82 | 258 / 258 | 96% | 16.78 | 221 / 230 |
liver | 100% | 1036.90 | 226 / 226 | 92% | 9.25 | 374 / 406 |
adipose | 100% | 2618.02 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3671.87 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 22.30 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 27.02 | 29 / 29 |
muscle | 100% | 2632.52 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 3538.04 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 21.21 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 12.65 | 1 / 1 |
heart | 99% | 2357.64 | 856 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 2691.27 | 912 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0097190 | Biological process | apoptotic signaling pathway |
GO_0030071 | Biological process | regulation of mitotic metaphase/anaphase transition |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_2000045 | Biological process | regulation of G1/S transition of mitotic cell cycle |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0006338 | Biological process | chromatin remodeling |
GO_0070316 | Biological process | regulation of G0 to G1 transition |
GO_1902459 | Biological process | positive regulation of stem cell population maintenance |
GO_2000819 | Biological process | regulation of nucleotide-excision repair |
GO_0006915 | Biological process | apoptotic process |
GO_1905454 | Biological process | negative regulation of myeloid progenitor cell differentiation |
GO_2000781 | Biological process | positive regulation of double-strand break repair |
GO_0007399 | Biological process | nervous system development |
GO_0071565 | Cellular component | nBAF complex |
GO_0005813 | Cellular component | centrosome |
GO_0016514 | Cellular component | SWI/SNF complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0062072 | Molecular function | H3K9me3 modified histone binding |
GO_0070577 | Molecular function | lysine-acetylated histone binding |
GO_0003714 | Molecular function | transcription corepressor activity |
GO_0046872 | Molecular function | metal ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | DPF2 |
Protein name | Zinc finger protein ubi-d4 (Apoptosis response zinc finger protein) (BRG1-associated factor 45D) (BAF45D) (D4, zinc and double PHD fingers family 2) (Protein requiem) Double PHD fingers 2 |
Synonyms | REQ UBID4 BAF45D |
Description | FUNCTION: Plays an active role in transcriptional regulation by binding modified histones H3 and H4 . Is a negative regulator of myeloid differentiation of hematopoietic progenitor cells . Might also have a role in the development and maturation of lymphoid cells (By similarity). Involved in the regulation of non-canonical NF-kappa-B pathway . . |
Accessions | ENST00000703426.1 ENST00000703393.1 A0A994J3H5 ENST00000530993.6 A0A994J3P2 ENST00000531989.1 Q92785 ENST00000528416.6 [Q92785-1] A0A994J6N1 ENST00000703425.1 ENST00000415073.6 [Q92785-2] A0A994J6A8 E9PN04 ENST00000532102.5 A0A994J414 H0YEI1 ENST00000703424.1 J3KMZ8 ENST00000703427.1 ENST00000252268.8 A0A994J426 |