Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 22 studies | 36% ± 18% | |
astrocyte | 18 studies | 38% ± 16% | |
oligodendrocyte | 17 studies | 69% ± 22% | |
macrophage | 16 studies | 42% ± 23% | |
oligodendrocyte precursor cell | 14 studies | 45% ± 18% | |
microglial cell | 14 studies | 65% ± 15% | |
glutamatergic neuron | 12 studies | 49% ± 25% | |
GABAergic neuron | 11 studies | 49% ± 22% | |
epithelial cell | 9 studies | 32% ± 21% | |
fibroblast | 9 studies | 32% ± 14% | |
mast cell | 9 studies | 27% ± 9% | |
B cell | 8 studies | 31% ± 13% | |
adipocyte | 8 studies | 25% ± 8% | |
myeloid cell | 7 studies | 41% ± 16% | |
neuron | 6 studies | 49% ± 19% | |
interneuron | 6 studies | 59% ± 17% | |
pericyte | 6 studies | 32% ± 14% | |
dendritic cell | 6 studies | 25% ± 6% | |
retinal cone cell | 5 studies | 49% ± 19% | |
endothelial cell of lymphatic vessel | 5 studies | 32% ± 11% | |
monocyte | 5 studies | 41% ± 7% | |
smooth muscle cell | 5 studies | 26% ± 6% | |
type I pneumocyte | 5 studies | 34% ± 10% | |
type II pneumocyte | 5 studies | 32% ± 10% | |
granule cell | 4 studies | 61% ± 7% | |
cardiac muscle cell | 4 studies | 36% ± 7% | |
ciliated cell | 4 studies | 22% ± 6% | |
Mueller cell | 4 studies | 47% ± 13% | |
amacrine cell | 4 studies | 28% ± 10% | |
retinal rod cell | 4 studies | 38% ± 6% | |
club cell | 4 studies | 30% ± 7% | |
hematopoietic precursor cell | 3 studies | 21% ± 7% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 59% ± 10% | |
GABAergic interneuron | 3 studies | 45% ± 8% | |
glial cell | 3 studies | 46% ± 13% | |
progenitor cell | 3 studies | 29% ± 6% | |
CD4-positive, alpha-beta T cell | 3 studies | 16% ± 1% | |
vein endothelial cell | 3 studies | 36% ± 19% | |
retinal bipolar neuron | 3 studies | 24% ± 7% | |
GABAergic amacrine cell | 3 studies | 25% ± 7% | |
glycinergic amacrine cell | 3 studies | 26% ± 5% | |
retinal ganglion cell | 3 studies | 21% ± 7% | |
endothelial cell of vascular tree | 3 studies | 36% ± 20% | |
cholangiocyte | 3 studies | 60% ± 14% | |
hepatocyte | 3 studies | 70% ± 22% | |
retinal pigment epithelial cell | 3 studies | 46% ± 25% | |
abnormal cell | 3 studies | 35% ± 22% | |
ependymal cell | 3 studies | 48% ± 16% | |
T cell | 3 studies | 24% ± 2% | |
alveolar macrophage | 3 studies | 50% ± 11% | |
capillary endothelial cell | 3 studies | 23% ± 5% | |
respiratory goblet cell | 3 studies | 34% ± 9% | |
naive B cell | 3 studies | 18% ± 1% | |
lymphocyte | 3 studies | 33% ± 7% | |
basal cell | 3 studies | 49% ± 30% | |
goblet cell | 3 studies | 46% ± 34% | |
mucus secreting cell | 3 studies | 28% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3180.58 | 1443 / 1445 | 100% | 49.99 | 183 / 183 |
brain | 100% | 6052.80 | 2641 / 2642 | 100% | 44.47 | 704 / 705 |
skin | 100% | 5558.37 | 1809 / 1809 | 99% | 36.00 | 467 / 472 |
breast | 100% | 2604.03 | 459 / 459 | 99% | 29.95 | 1104 / 1118 |
lung | 99% | 2728.40 | 574 / 578 | 99% | 28.86 | 1146 / 1155 |
intestine | 100% | 2500.77 | 964 / 966 | 99% | 21.90 | 520 / 527 |
stomach | 99% | 1619.92 | 357 / 359 | 98% | 22.79 | 280 / 286 |
prostate | 100% | 2165.98 | 244 / 245 | 97% | 20.17 | 489 / 502 |
uterus | 100% | 2091.14 | 170 / 170 | 97% | 21.83 | 445 / 459 |
bladder | 100% | 1813.76 | 21 / 21 | 95% | 17.75 | 479 / 504 |
ovary | 100% | 2793.53 | 180 / 180 | 94% | 13.98 | 405 / 430 |
pancreas | 96% | 1459.14 | 316 / 328 | 98% | 20.15 | 174 / 178 |
thymus | 100% | 2284.24 | 652 / 653 | 94% | 12.38 | 569 / 605 |
adrenal gland | 100% | 2762.47 | 258 / 258 | 92% | 13.88 | 212 / 230 |
kidney | 96% | 1433.61 | 85 / 89 | 94% | 17.24 | 850 / 901 |
liver | 100% | 1995.19 | 226 / 226 | 85% | 10.97 | 344 / 406 |
spleen | 100% | 4268.49 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 30.16 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.37 | 1 / 1 |
adipose | 100% | 2336.11 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 98% | 1586.28 | 1310 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 95% | 20.75 | 76 / 80 |
peripheral blood | 95% | 3512.07 | 882 / 929 | 0% | 0 | 0 / 0 |
muscle | 94% | 1250.67 | 758 / 803 | 0% | 0 | 0 / 0 |
heart | 88% | 1246.42 | 757 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 83% | 10.95 | 24 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_2000758 | Biological process | positive regulation of peptidyl-lysine acetylation |
GO_0030517 | Biological process | negative regulation of axon extension |
GO_0008150 | Biological process | biological_process |
GO_0007399 | Biological process | nervous system development |
GO_0043204 | Cellular component | perikaryon |
GO_0030424 | Cellular component | axon |
GO_0070062 | Cellular component | extracellular exosome |
GO_0030425 | Cellular component | dendrite |
GO_0016020 | Cellular component | membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0043014 | Molecular function | alpha-tubulin binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | DIP2B |
Protein name | DIP2B protein Disco interacting protein 2 homolog B Disco-interacting protein 2 homolog B (DIP2 homolog B) |
Synonyms | KIAA1463 |
Description | FUNCTION: Negatively regulates axonal outgrowth and is essential for normal synaptic transmission. Not required for regulation of axon polarity. Promotes acetylation of alpha-tubulin. . |
Accessions | ENST00000546732.1 ENST00000301180.10 Q96IB4 Q9P265 H0YIU5 |