Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 6699.19 | 459 / 459 | 100% | 57.65 | 1118 / 1118 |
esophagus | 100% | 6335.89 | 1445 / 1445 | 100% | 42.05 | 183 / 183 |
lung | 100% | 6824.84 | 578 / 578 | 100% | 42.55 | 1155 / 1155 |
ovary | 100% | 5573.79 | 180 / 180 | 100% | 34.38 | 430 / 430 |
prostate | 100% | 6930.06 | 245 / 245 | 100% | 52.89 | 502 / 502 |
uterus | 100% | 6605.09 | 170 / 170 | 100% | 38.55 | 458 / 459 |
stomach | 100% | 5660.47 | 359 / 359 | 100% | 33.28 | 285 / 286 |
intestine | 100% | 6147.40 | 966 / 966 | 100% | 31.62 | 525 / 527 |
pancreas | 100% | 7534.91 | 328 / 328 | 99% | 29.81 | 177 / 178 |
bladder | 100% | 5656.10 | 21 / 21 | 99% | 32.38 | 501 / 504 |
thymus | 100% | 7223.16 | 653 / 653 | 99% | 32.18 | 600 / 605 |
brain | 98% | 3046.36 | 2601 / 2642 | 100% | 31.69 | 705 / 705 |
kidney | 100% | 4439.57 | 89 / 89 | 98% | 25.53 | 882 / 901 |
skin | 100% | 9339.48 | 1809 / 1809 | 98% | 35.44 | 461 / 472 |
adrenal gland | 100% | 8578.24 | 258 / 258 | 96% | 23.69 | 220 / 230 |
liver | 100% | 4867.91 | 225 / 226 | 96% | 19.26 | 390 / 406 |
adipose | 100% | 6596.98 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 7049.08 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 24.15 | 29 / 29 |
spleen | 100% | 6296.04 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 39.32 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 12.60 | 1 / 1 |
muscle | 99% | 2754.04 | 796 / 803 | 0% | 0 | 0 / 0 |
heart | 96% | 4288.73 | 825 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 94% | 5610.81 | 873 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 80% | 11.92 | 64 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006886 | Biological process | intracellular protein transport |
GO_0006888 | Biological process | endoplasmic reticulum to Golgi vesicle-mediated transport |
GO_0006890 | Biological process | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum |
GO_0006891 | Biological process | intra-Golgi vesicle-mediated transport |
GO_0000139 | Cellular component | Golgi membrane |
GO_0030126 | Cellular component | COPI vesicle coat |
GO_0005829 | Cellular component | cytosol |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0030133 | Cellular component | transport vesicle |
GO_0005198 | Molecular function | structural molecule activity |
GO_0005515 | Molecular function | protein binding |
Gene name | COPB2 |
Protein name | COPI coat complex subunit beta 2 Coatomer subunit beta' (Beta'-coat protein) (Beta'-COP) (p102) Coatomer subunit beta' |
Synonyms | |
Description | FUNCTION: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. In mammals, the coatomer can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins; the complex also influences the Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. .; FUNCTION: This coatomer complex protein, essential for Golgi budding and vesicular trafficking, is a selective binding protein (RACK) for protein kinase C, epsilon type. It binds to Golgi membranes in a GTP-dependent manner (By similarity). . FUNCTION: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. In mammals, the coatomer can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins; the complex also influences the Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. .; FUNCTION: This coatomer complex protein, essential for Golgi budding and vesicular trafficking, is a selective binding protein (RACK) for protein kinase C, epsilon type. It binds to Golgi membranes in a GTP-dependent manner. . FUNCTION: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. In mammals, the coatomer can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins; the complex also influences the Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. .; FUNCTION: This coatomer complex protein, essential for Golgi budding and vesicular trafficking, is a selective binding protein (RACK) for protein kinase C, epsilon type. It binds to Golgi membranes in a GTP-dependent manner. . FUNCTION: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. In mammals, the coatomer can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins; the complex also influences the Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. .; FUNCTION: This coatomer complex protein, essential for Golgi budding and vesicular trafficking, is a selective binding protein (RACK) for protein kinase C, epsilon type. It binds to Golgi membranes in a GTP-dependent manner. . |
Accessions | ENST00000333188.10 [P35606-1] D6R997 ENST00000507777.6 [P35606-2] ENST00000503326.6 ENST00000515006.5 H0YAC7 P35606 D6RBZ7 ENST00000677601.1 ENST00000510181.6 D6RBG7 ENST00000513274.5 A0A7I2V258 ENST00000514508.2 [P35606-2] ENST00000512242.6 [P35606-2] ENST00000677073.1 ENST00000512309.2 H0Y938 A0A7I2V3G0 D6RCL6 A0A7I2V526 ENST00000512242 ENST00000677309.1 A0A7I2YQF9 ENST00000512153.5 ENST00000514508 D6RBT6 |