CNPPD1 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
B cell	16 studies	24% ± 4%	Explore
memory B cell	15 studies	24% ± 5%	Explore
naive B cell	14 studies	23% ± 6%	Explore
conventional dendritic cell	9 studies	30% ± 17%	Explore
natural killer cell	9 studies	20% ± 4%	Explore
regulatory T cell	9 studies	20% ± 2%	Explore
non-classical monocyte	8 studies	27% ± 9%	Explore
gamma-delta T cell	8 studies	18% ± 2%	Explore
CD16-positive, CD56-dim natural killer cell, human	7 studies	20% ± 4%	Explore
erythrocyte	6 studies	25% ± 10%	Explore
CD8-positive, alpha-beta memory T cell	6 studies	19% ± 5%	Explore
dendritic cell	6 studies	34% ± 14%	Explore
epithelial cell	6 studies	30% ± 8%	Explore
CD4-positive, alpha-beta memory T cell	5 studies	19% ± 3%	Explore
classical monocyte	5 studies	21% ± 6%	Explore
CD8-positive, alpha-beta T cell	5 studies	21% ± 1%	Explore
abnormal cell	5 studies	22% ± 5%	Explore
CD4-positive, alpha-beta T cell	4 studies	17% ± 1%	Explore
endothelial cell	4 studies	19% ± 3%	Explore
CD16-negative, CD56-bright natural killer cell, human	4 studies	20% ± 4%	Explore
effector CD4-positive, alpha-beta T cell	4 studies	21% ± 3%	Explore
effector memory CD4-positive, alpha-beta T cell	4 studies	18% ± 1%	Explore
effector memory CD8-positive, alpha-beta T cell	4 studies	19% ± 3%	Explore
goblet cell	4 studies	19% ± 2%	Explore
plasmacytoid dendritic cell	4 studies	24% ± 4%	Explore
immature B cell	3 studies	24% ± 8%	Explore
T follicular helper cell	3 studies	17% ± 0%	Explore
exhausted T cell	3 studies	19% ± 3%	Explore
macrophage	3 studies	16% ± 1%	Explore
type I pneumocyte	3 studies	21% ± 5%	Explore
mature NK T cell	3 studies	18% ± 1%	Explore
double negative thymocyte	3 studies	19% ± 1%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	3 studies	17% ± 1%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	8 studies	20% ± 4%	Explore
lymph node	3 studies	20% ± 4%	Explore
intestine	3 studies	17% ± 1%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	6067.53	1445 / 1445	100%	56.44	183 / 183
kidney	100%	7268.75	89 / 89	100%	165.99	901 / 901
skin	100%	4843.14	1809 / 1809	100%	115.16	472 / 472
stomach	100%	3767.35	359 / 359	100%	84.15	286 / 286
thymus	100%	5791.96	653 / 653	100%	122.30	604 / 605
uterus	100%	3969.65	170 / 170	100%	77.01	458 / 459
prostate	100%	4440.82	245 / 245	100%	145.45	500 / 502
liver	100%	2322.62	225 / 226	100%	61.91	406 / 406
ovary	100%	4107.94	180 / 180	100%	75.44	428 / 430
lung	100%	3794.42	577 / 578	100%	75.36	1151 / 1155
intestine	100%	5579.28	966 / 966	99%	98.45	524 / 527
bladder	100%	4970.52	21 / 21	99%	82.83	501 / 504
pancreas	99%	2606.74	326 / 328	100%	87.03	178 / 178
brain	99%	2761.29	2622 / 2642	100%	103.61	705 / 705
breast	100%	4739.88	459 / 459	99%	102.24	1107 / 1118
adrenal gland	100%	7814.11	258 / 258	99%	70.40	227 / 230
adipose	100%	4921.63	1204 / 1204	0%	0	0 / 0
blood vessel	100%	4604.02	1335 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	100%	248.49	80 / 80
lymph node	0%	0	0 / 0	100%	141.60	29 / 29
peripheral blood	100%	6561.86	929 / 929	0%	0	0 / 0
spleen	100%	6212.98	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	81.78	45 / 45
ureter	0%	0	0 / 0	100%	57.65	1 / 1
muscle	100%	5040.26	802 / 803	0%	0	0 / 0
heart	98%	3401.15	848 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0