CLDN4 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
epithelial cell	24 studies	67% ± 24%	Explore
ciliated cell	20 studies	62% ± 23%	Explore
basal cell	20 studies	51% ± 22%	Explore
goblet cell	12 studies	57% ± 26%	Explore
secretory cell	11 studies	77% ± 17%	Explore
type I pneumocyte	10 studies	57% ± 23%	Explore
type II pneumocyte	10 studies	49% ± 24%	Explore
club cell	10 studies	53% ± 29%	Explore
ionocyte	7 studies	53% ± 17%	Explore
respiratory goblet cell	7 studies	50% ± 19%	Explore
enterocyte	7 studies	68% ± 18%	Explore
progenitor cell	7 studies	67% ± 25%	Explore
kidney distal convoluted tubule epithelial cell	5 studies	42% ± 16%	Explore
enteroendocrine cell	5 studies	50% ± 25%	Explore
transit amplifying cell	5 studies	52% ± 25%	Explore
deuterosomal cell	4 studies	36% ± 3%	Explore
duct epithelial cell	4 studies	62% ± 12%	Explore
squamous epithelial cell	4 studies	66% ± 12%	Explore
intestinal crypt stem cell	4 studies	66% ± 16%	Explore
abnormal cell	4 studies	42% ± 20%	Explore
kidney loop of Henle epithelial cell	4 studies	51% ± 10%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	82% ± 10%	Explore
mucus secreting cell	4 studies	31% ± 12%	Explore
hillock cell	3 studies	33% ± 13%	Explore
kidney connecting tubule epithelial cell	3 studies	59% ± 17%	Explore
epithelial cell of proximal tubule	3 studies	22% ± 7%	Explore
renal alpha-intercalated cell	3 studies	40% ± 9%	Explore
renal principal cell	3 studies	63% ± 17%	Explore
extravillous trophoblast	3 studies	67% ± 12%	Explore
placental villous trophoblast	3 studies	85% ± 12%	Explore
brush cell	3 studies	52% ± 21%	Explore
luminal cell of prostate epithelium	3 studies	86% ± 5%	Explore
pancreatic ductal cell	3 studies	74% ± 2%	Explore
progenitor cell of mammary luminal epithelium	3 studies	69% ± 30%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	8 studies	39% ± 21%	Explore
intestine	8 studies	35% ± 24%	Explore
pancreas	4 studies	27% ± 4%	Explore
prostate	4 studies	52% ± 16%	Explore
breast	4 studies	32% ± 15%	Explore
kidney	3 studies	25% ± 4%	Explore
placenta	3 studies	54% ± 25%	Explore
esophagus	3 studies	39% ± 13%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
pancreas	99%	5499.45	324 / 328	90%	339.63	161 / 178
thymus	100%	10108.98	652 / 653	85%	331.30	516 / 605
prostate	85%	6922.76	209 / 245	98%	333.10	492 / 502
lung	88%	5661.56	509 / 578	92%	255.65	1059 / 1155
kidney	99%	9082.11	88 / 89	64%	147.77	576 / 901
breast	59%	6447.76	270 / 459	95%	212.35	1061 / 1118
bladder	57%	8245.52	12 / 21	92%	509.67	464 / 504
intestine	46%	11236.41	447 / 966	97%	552.51	513 / 527
esophagus	39%	7808.99	564 / 1445	80%	209.01	146 / 183
stomach	16%	514.22	58 / 359	94%	442.47	268 / 286
ureter	0%	0	0 / 0	100%	422.44	1 / 1
ovary	1%	17.73	2 / 180	98%	321.40	423 / 430
uterus	7%	424.59	12 / 170	79%	243.87	362 / 459
tonsil	0%	0	0 / 0	82%	149.28	37 / 45
skin	72%	9808.12	1306 / 1809	1%	1.01	5 / 472
liver	1%	21.66	3 / 226	20%	34.04	80 / 406
adipose	1%	39.84	17 / 1204	0%	0	0 / 0
adrenal gland	0%	0	0 / 258	0%	0.44	1 / 230
spleen	0%	7.70	1 / 241	0%	0	0 / 0
muscle	0%	5.69	2 / 803	0%	0	0 / 0
blood vessel	0%	6.33	2 / 1335	0%	0	0 / 0
heart	0%	4.96	1 / 861	0%	0	0 / 0
peripheral blood	0%	13.84	1 / 929	0%	0	0 / 0
brain	0%	1.20	2 / 2642	0%	0	0 / 705
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0