Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 6058.07 | 1445 / 1445 | 100% | 50.87 | 183 / 183 |
breast | 100% | 6269.39 | 459 / 459 | 100% | 54.34 | 1117 / 1118 |
lung | 100% | 5559.54 | 578 / 578 | 100% | 39.09 | 1153 / 1155 |
intestine | 100% | 5742.14 | 966 / 966 | 100% | 29.66 | 526 / 527 |
ovary | 100% | 7457.93 | 180 / 180 | 100% | 30.75 | 429 / 430 |
uterus | 100% | 6404.53 | 170 / 170 | 100% | 36.58 | 457 / 459 |
brain | 100% | 5705.78 | 2634 / 2642 | 100% | 39.93 | 704 / 705 |
bladder | 100% | 5878.86 | 21 / 21 | 99% | 35.99 | 501 / 504 |
stomach | 100% | 4403.28 | 359 / 359 | 99% | 31.08 | 284 / 286 |
prostate | 100% | 5485.18 | 245 / 245 | 99% | 30.49 | 498 / 502 |
thymus | 100% | 6143.94 | 653 / 653 | 99% | 39.15 | 600 / 605 |
pancreas | 100% | 3434.05 | 327 / 328 | 98% | 27.71 | 175 / 178 |
adrenal gland | 100% | 6707.09 | 258 / 258 | 97% | 26.87 | 224 / 230 |
kidney | 100% | 4133.89 | 89 / 89 | 97% | 25.86 | 876 / 901 |
skin | 100% | 8224.82 | 1809 / 1809 | 96% | 36.13 | 454 / 472 |
liver | 100% | 2937.06 | 226 / 226 | 89% | 14.11 | 361 / 406 |
blood vessel | 100% | 5695.70 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 29.47 | 29 / 29 |
spleen | 100% | 5024.35 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 44.10 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.59 | 1 / 1 |
adipose | 100% | 5941.10 | 1203 / 1204 | 0% | 0 | 0 / 0 |
muscle | 98% | 2038.10 | 789 / 803 | 0% | 0 | 0 / 0 |
heart | 95% | 2530.12 | 816 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 90% | 18.68 | 72 / 80 |
peripheral blood | 64% | 3818.40 | 598 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016567 | Biological process | protein ubiquitination |
GO_0045899 | Biological process | positive regulation of RNA polymerase II transcription preinitiation complex assembly |
GO_0043086 | Biological process | negative regulation of catalytic activity |
GO_0030154 | Biological process | cell differentiation |
GO_0010265 | Biological process | SCF complex assembly |
GO_0000151 | Cellular component | ubiquitin ligase complex |
GO_0005576 | Cellular component | extracellular region |
GO_0016020 | Cellular component | membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0034774 | Cellular component | secretory granule lumen |
GO_1904813 | Cellular component | ficolin-1-rich granule lumen |
GO_0005829 | Cellular component | cytosol |
GO_0031461 | Cellular component | cullin-RING ubiquitin ligase complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0017025 | Molecular function | TBP-class protein binding |
GO_0005515 | Molecular function | protein binding |
Gene name | CAND1 |
Protein name | Cullin-associated NEDD8-dissociated protein 1 (Cullin-associated and neddylation-dissociated protein 1) Cullin-associated NEDD8-dissociated protein 1 (Cullin-associated and neddylation-dissociated protein 1) (TBP-interacting protein of 120 kDa A) (TBP-interacting protein 120A) (p120 CAND1) Cullin associated and neddylation dissociated 1 |
Synonyms | TIP120 KIAA0829 TIP120A |
Description | FUNCTION: Key assembly factor of SCF (SKP1-CUL1-F-box protein) E3 ubiquitin ligase complexes that promotes the exchange of the substrate-recognition F-box subunit in SCF complexes, thereby playing a key role in the cellular repertoire of SCF complexes. Acts as a F-box protein exchange factor. The exchange activity of CAND1 is coupled with cycles of neddylation conjugation: in the deneddylated state, cullin-binding CAND1 binds CUL1-RBX1, increasing dissociation of the SCF complex and promoting exchange of the F-box protein. Probably plays a similar role in other cullin-RING E3 ubiquitin ligase complexes. . |
Accessions | H0YH27 F5H6I6 ENST00000544619.1 ENST00000545606.6 [Q86VP6-1] Q86VP6 ENST00000540525.1 A0A0C4DGH5 ENST00000540319.5 |