Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 30 studies | 32% ± 13% | |
endothelial cell | 23 studies | 28% ± 10% | |
astrocyte | 21 studies | 51% ± 23% | |
basal cell | 19 studies | 37% ± 18% | |
macrophage | 15 studies | 32% ± 16% | |
smooth muscle cell | 14 studies | 22% ± 6% | |
epithelial cell | 14 studies | 40% ± 21% | |
oligodendrocyte precursor cell | 14 studies | 36% ± 18% | |
type II pneumocyte | 12 studies | 47% ± 18% | |
plasmacytoid dendritic cell | 12 studies | 25% ± 6% | |
type I pneumocyte | 11 studies | 30% ± 12% | |
glutamatergic neuron | 11 studies | 41% ± 24% | |
adipocyte | 11 studies | 68% ± 18% | |
pericyte | 11 studies | 26% ± 12% | |
club cell | 10 studies | 34% ± 10% | |
classical monocyte | 10 studies | 26% ± 7% | |
microglial cell | 10 studies | 32% ± 17% | |
endothelial cell of lymphatic vessel | 9 studies | 25% ± 7% | |
secretory cell | 9 studies | 31% ± 14% | |
GABAergic neuron | 9 studies | 42% ± 21% | |
goblet cell | 9 studies | 33% ± 10% | |
endothelial cell of vascular tree | 9 studies | 24% ± 9% | |
respiratory goblet cell | 8 studies | 40% ± 14% | |
connective tissue cell | 8 studies | 29% ± 16% | |
amacrine cell | 8 studies | 40% ± 17% | |
retinal rod cell | 8 studies | 38% ± 15% | |
retinal cone cell | 8 studies | 62% ± 19% | |
monocyte | 7 studies | 27% ± 7% | |
myofibroblast cell | 7 studies | 19% ± 5% | |
oligodendrocyte | 7 studies | 26% ± 13% | |
interneuron | 6 studies | 43% ± 24% | |
myeloid cell | 6 studies | 31% ± 9% | |
ciliated cell | 6 studies | 32% ± 16% | |
retina horizontal cell | 6 studies | 45% ± 18% | |
mucus secreting cell | 6 studies | 45% ± 14% | |
dendritic cell | 6 studies | 27% ± 4% | |
vein endothelial cell | 6 studies | 30% ± 13% | |
Mueller cell | 6 studies | 81% ± 7% | |
abnormal cell | 5 studies | 33% ± 13% | |
neuron | 5 studies | 38% ± 25% | |
OFF-bipolar cell | 5 studies | 41% ± 18% | |
retinal ganglion cell | 5 studies | 67% ± 24% | |
adventitial cell | 5 studies | 29% ± 7% | |
cardiac muscle cell | 5 studies | 41% ± 6% | |
duct epithelial cell | 4 studies | 38% ± 25% | |
pancreatic A cell | 4 studies | 47% ± 16% | |
retinal bipolar neuron | 4 studies | 37% ± 8% | |
glial cell | 4 studies | 28% ± 8% | |
granule cell | 4 studies | 34% ± 9% | |
glycinergic amacrine cell | 4 studies | 38% ± 19% | |
retinal pigment epithelial cell | 4 studies | 47% ± 21% | |
ON-bipolar cell | 4 studies | 43% ± 19% | |
luminal hormone-sensing cell of mammary gland | 4 studies | 30% ± 7% | |
hepatocyte | 4 studies | 47% ± 11% | |
muscle cell | 4 studies | 28% ± 5% | |
hillock cell | 3 studies | 28% ± 10% | |
squamous epithelial cell | 3 studies | 40% ± 25% | |
type B pancreatic cell | 3 studies | 50% ± 24% | |
GABAergic interneuron | 3 studies | 30% ± 2% | |
placental villous trophoblast | 3 studies | 23% ± 2% | |
serous secreting cell | 3 studies | 29% ± 9% | |
mesothelial cell | 3 studies | 29% ± 13% | |
GABAergic amacrine cell | 3 studies | 46% ± 22% | |
rod bipolar cell | 3 studies | 51% ± 12% | |
pancreatic ductal cell | 3 studies | 50% ± 18% | |
neural progenitor cell | 3 studies | 40% ± 9% | |
ependymal cell | 3 studies | 53% ± 10% | |
enteroendocrine cell | 3 studies | 24% ± 6% | |
alveolar macrophage | 3 studies | 43% ± 10% | |
Schwann cell | 3 studies | 36% ± 14% | |
mast cell | 3 studies | 24% ± 5% | |
conventional dendritic cell | 3 studies | 16% ± 1% | |
myoepithelial cell | 3 studies | 33% ± 17% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 17 studies | 33% ± 19% | |
lung | 13 studies | 31% ± 13% | |
eye | 11 studies | 44% ± 15% | |
heart | 5 studies | 28% ± 8% | |
placenta | 4 studies | 22% ± 9% | |
liver | 4 studies | 29% ± 15% | |
adipose | 4 studies | 43% ± 26% | |
pancreas | 3 studies | 51% ± 17% | |
breast | 3 studies | 21% ± 4% | |
prostate | 3 studies | 21% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 6537.78 | 1444 / 1445 | 99% | 40.70 | 181 / 183 |
intestine | 100% | 6709.08 | 964 / 966 | 98% | 37.21 | 516 / 527 |
lung | 99% | 7803.92 | 572 / 578 | 99% | 62.19 | 1140 / 1155 |
stomach | 100% | 8683.46 | 359 / 359 | 97% | 35.14 | 278 / 286 |
brain | 97% | 6480.28 | 2561 / 2642 | 99% | 25.31 | 701 / 705 |
breast | 100% | 15841.49 | 459 / 459 | 96% | 52.02 | 1074 / 1118 |
bladder | 100% | 10492.86 | 21 / 21 | 96% | 41.05 | 484 / 504 |
uterus | 100% | 7172.14 | 170 / 170 | 93% | 24.12 | 425 / 459 |
skin | 99% | 14185.94 | 1797 / 1809 | 91% | 30.14 | 430 / 472 |
pancreas | 88% | 2746.10 | 288 / 328 | 97% | 38.02 | 172 / 178 |
thymus | 100% | 9731.87 | 651 / 653 | 83% | 16.02 | 505 / 605 |
kidney | 88% | 3156.82 | 78 / 89 | 90% | 27.70 | 811 / 901 |
ovary | 100% | 7190.66 | 180 / 180 | 75% | 10.04 | 323 / 430 |
adrenal gland | 100% | 22534.03 | 258 / 258 | 73% | 19.64 | 167 / 230 |
liver | 85% | 3057.81 | 192 / 226 | 86% | 27.23 | 348 / 406 |
prostate | 96% | 5453.00 | 236 / 245 | 69% | 9.54 | 347 / 502 |
adipose | 100% | 21393.10 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 10588.57 | 1335 / 1335 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.95 | 1 / 1 |
muscle | 100% | 8261.54 | 799 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 26.68 | 43 / 45 |
spleen | 93% | 3427.90 | 223 / 241 | 0% | 0 | 0 / 0 |
heart | 91% | 5433.86 | 782 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 65% | 13.06 | 52 / 80 |
peripheral blood | 62% | 3863.33 | 576 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 14% | 1.09 | 4 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008285 | Biological process | negative regulation of cell population proliferation |
GO_0008283 | Biological process | cell population proliferation |
GO_0042264 | Biological process | peptidyl-aspartic acid hydroxylation |
GO_0045862 | Biological process | positive regulation of proteolysis |
GO_0006936 | Biological process | muscle contraction |
GO_0097202 | Biological process | activation of cysteine-type endopeptidase activity |
GO_0060021 | Biological process | roof of mouth development |
GO_1901879 | Biological process | regulation of protein depolymerization |
GO_0035108 | Biological process | limb morphogenesis |
GO_0060325 | Biological process | face morphogenesis |
GO_0031647 | Biological process | regulation of protein stability |
GO_0007389 | Biological process | pattern specification process |
GO_0032541 | Cellular component | cortical endoplasmic reticulum |
GO_0005886 | Cellular component | plasma membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0033017 | Cellular component | sarcoplasmic reticulum membrane |
GO_0008307 | Molecular function | structural constituent of muscle |
GO_0062101 | Molecular function | peptidyl-aspartic acid 3-dioxygenase activity |
GO_0009055 | Molecular function | electron transfer activity |
GO_0005198 | Molecular function | structural molecule activity |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | ASPH |
Protein name | ASPH protein Aspartate beta-hydroxylase Aspartate beta-hydroxylase isoform f Alternative protein ASPH Aspartyl/asparaginyl beta-hydroxylase (EC 1.14.11.16) (Aspartate beta-hydroxylase) (ASP beta-hydroxylase) (Peptide-aspartate beta-dioxygenase) |
Synonyms | hCG_1787219 BAH |
Description | FUNCTION: [Isoform 1]: Specifically hydroxylates an Asp or Asn residue in certain epidermal growth factor-like (EGF) domains of a number of proteins. .; FUNCTION: [Isoform 8]: Membrane-bound Ca(2+)-sensing protein, which is a structural component of the ER-plasma membrane junctions. Isoform 8 regulates the activity of Ca(+2) released-activated Ca(+2) (CRAC) channels in T-cells. . |
Accessions | ENST00000517847.7 [Q12797-8] A0A087X0J4 E5RG29 ENST00000522603.5 [Q12797-4] A0A087WW05 ENST00000522349.5 ENST00000518306.5 E5RG56 G3XAN5 ENST00000445642.6 [Q12797-11] ENST00000522835.5 [Q12797-9] ENST00000517856.5 ENST00000517661.5 ENST00000389204.9 [Q12797-3] ENST00000356457.9 [Q12797-2] ENST00000519264.5 Q6PJH4 E5RHJ2 ENST00000523927.5 E5RJL3 E5RHK2 B3GQE5 ENST00000518068.5 [Q12797-6] A0A087WUJ2 A0A087WW51 ENST00000519234.5 B7ZM96 ENST00000519678.5 L8EA92 ENST00000379454.9 [Q12797-1] ENST00000517903.5 [Q12797-5] ENST00000379449.11 [Q12797-7] ENST00000541428.5 [Q12797-10] ENST00000524173.5 ENST00000522919.5 Q12797 B8Y0L3 |