ALG13 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
B cell	21 studies	21% ± 5%	Explore
endothelial cell	19 studies	28% ± 9%	Explore
mast cell	14 studies	20% ± 5%	Explore
CD4-positive, alpha-beta T cell	12 studies	20% ± 4%	Explore
naive B cell	11 studies	23% ± 4%	Explore
microglial cell	10 studies	32% ± 11%	Explore
memory B cell	10 studies	22% ± 6%	Explore
macrophage	10 studies	29% ± 11%	Explore
fibroblast	8 studies	27% ± 10%	Explore
CD8-positive, alpha-beta T cell	8 studies	18% ± 2%	Explore
natural killer cell	7 studies	18% ± 2%	Explore
CD8-positive, alpha-beta memory T cell	7 studies	21% ± 5%	Explore
endothelial cell of lymphatic vessel	7 studies	29% ± 11%	Explore
oligodendrocyte	7 studies	30% ± 7%	Explore
pericyte	7 studies	21% ± 8%	Explore
epithelial cell	6 studies	37% ± 17%	Explore
adipocyte	6 studies	23% ± 6%	Explore
smooth muscle cell	6 studies	19% ± 2%	Explore
T cell	5 studies	20% ± 3%	Explore
classical monocyte	5 studies	20% ± 6%	Explore
non-classical monocyte	5 studies	20% ± 4%	Explore
effector memory CD8-positive, alpha-beta T cell	5 studies	22% ± 6%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	5 studies	18% ± 2%	Explore
interneuron	5 studies	34% ± 20%	Explore
myeloid cell	5 studies	22% ± 6%	Explore
CD16-negative, CD56-bright natural killer cell, human	5 studies	18% ± 1%	Explore
ciliated cell	5 studies	29% ± 7%	Explore
glutamatergic neuron	5 studies	49% ± 25%	Explore
leukocyte	5 studies	23% ± 5%	Explore
basal cell	5 studies	28% ± 11%	Explore
mucosal invariant T cell	4 studies	19% ± 2%	Explore
CD16-positive, CD56-dim natural killer cell, human	4 studies	17% ± 2%	Explore
dendritic cell	4 studies	26% ± 10%	Explore
lymphocyte	4 studies	30% ± 9%	Explore
gamma-delta T cell	4 studies	27% ± 6%	Explore
regulatory T cell	4 studies	21% ± 3%	Explore
GABAergic neuron	4 studies	47% ± 18%	Explore
astrocyte	4 studies	33% ± 7%	Explore
oligodendrocyte precursor cell	4 studies	29% ± 7%	Explore
goblet cell	4 studies	27% ± 12%	Explore
club cell	4 studies	18% ± 4%	Explore
type B pancreatic cell	3 studies	27% ± 9%	Explore
mononuclear phagocyte	3 studies	18% ± 3%	Explore
conventional dendritic cell	3 studies	33% ± 11%	Explore
vein endothelial cell	3 studies	27% ± 14%	Explore
CD4-positive, alpha-beta memory T cell	3 studies	22% ± 9%	Explore
abnormal cell	3 studies	20% ± 2%	Explore
intestinal crypt stem cell	3 studies	17% ± 2%	Explore
respiratory goblet cell	3 studies	22% ± 4%	Explore
monocyte	3 studies	20% ± 2%	Explore
T follicular helper cell	3 studies	25% ± 5%	Explore
plasmacytoid dendritic cell	3 studies	23% ± 6%	Explore
mature NK T cell	3 studies	22% ± 7%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
brain	7 studies	39% ± 19%	Explore
peripheral blood	4 studies	23% ± 5%	Explore
lung	4 studies	22% ± 3%	Explore
adipose	4 studies	21% ± 3%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
bladder	100%	2546.52	21 / 21	100%	10.96	504 / 504
breast	100%	2807.16	459 / 459	100%	12.90	1118 / 1118
esophagus	100%	2259.30	1445 / 1445	100%	12.02	183 / 183
intestine	100%	2813.75	966 / 966	100%	11.34	527 / 527
lung	100%	2762.68	578 / 578	100%	12.21	1155 / 1155
prostate	100%	3520.97	245 / 245	100%	16.47	502 / 502
stomach	100%	2023.94	359 / 359	100%	12.18	286 / 286
uterus	100%	3334.22	170 / 170	100%	11.39	459 / 459
kidney	100%	2209.25	89 / 89	100%	11.42	900 / 901
adrenal gland	100%	2348.90	258 / 258	100%	11.84	229 / 230
ovary	100%	3134.66	180 / 180	100%	9.35	428 / 430
thymus	100%	3228.37	653 / 653	100%	12.67	602 / 605
brain	99%	1492.16	2626 / 2642	100%	13.26	705 / 705
liver	100%	1583.84	226 / 226	99%	7.94	403 / 406
pancreas	100%	1381.38	327 / 328	99%	11.09	176 / 178
skin	100%	2425.26	1809 / 1809	98%	10.78	464 / 472
adipose	100%	2637.40	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	12.69	29 / 29
spleen	100%	4321.76	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	8.50	45 / 45
ureter	0%	0	0 / 0	100%	3.22	1 / 1
blood vessel	100%	2430.12	1334 / 1335	0%	0	0 / 0
heart	99%	1493.29	856 / 861	0%	0	0 / 0
muscle	99%	956.22	791 / 803	0%	0	0 / 0
eye	0%	0	0 / 0	91%	7.11	73 / 80
peripheral blood	72%	1079.59	673 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0006488	Biological process	dolichol-linked oligosaccharide biosynthetic process
GO_0006487	Biological process	protein N-linked glycosylation
GO_0006508	Biological process	proteolysis
GO_0005789	Cellular component	endoplasmic reticulum membrane
GO_0004577	Molecular function	N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity
GO_0004843	Molecular function	cysteine-type deubiquitinase activity

IV. Literature review

[source]

Gene name	ALG13
Protein name	ALG13 UDP-N-acetylglucosaminyltransferase subunit N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase (EC 2.4.1.141) Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 (EC 2.4.1.141) (EC 3.4.19.12) (Asparagine-linked glycosylation 13 homolog) (Glycosyltransferase 28 domain-containing protein 1) (UDP-N-acetylglucosamine transferase subunit ALG13 homolog) ubiquitinyl hydrolase 1 (EC 3.4.19.12)
Synonyms	CXorf45 GLT28D1 MDS031
Description	FUNCTION: [Isoform 1]: Possible multifunctional enzyme with both glycosyltransferase and deubiquitinase activities.; FUNCTION: [Isoform 2]: May be involved in protein N-glycosylation, second step of the dolichol-linked oligosaccharide pathway.
Accessions	Q9NP73 ENST00000624881.3 ENST00000371979.7 [Q9NP73-2] ENST00000492038.5 ENST00000622997.3 ENST00000474121.1 ENST00000623310.1 ENST00000623622.2 A0A087WX01 A0A087WT15 ENST00000623144.3 A0A096LPK3 A0A096LP54 ENST00000623255.1 ENST00000624161.3 ENST00000699778.1 ENST00000487141.5 ENST00000482374.5 A0A8V8TQ59 A0A096LPI3 A0A1B0GVW6 A0A087WVG5 ENST00000623148.3 A0A087WTT9 ENST00000394780.8 [Q9NP73-1] ENST00000699748.1 ENST00000636363.1 A0A096LNL2 ENST00000471924.5 ENST00000622986.3 ENST00000486353.5 ENST00000468657.5 ENST00000482742.5 ENST00000489033.5 ENST00000470971.5 A0A096LNJ5 A0A096LNJ4 A0A096LP10 D6RE84 A0A087WX43 ENST00000436609.5 [Q9NP73-4] ENST00000495283.5 ENST00000473389.5 ENST00000623189.1

ALG13 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review