Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 20 studies | 31% ± 13% | |
astrocyte | 16 studies | 35% ± 16% | |
fibroblast | 16 studies | 24% ± 9% | |
oligodendrocyte | 12 studies | 33% ± 11% | |
pericyte | 12 studies | 24% ± 9% | |
microglial cell | 12 studies | 34% ± 11% | |
macrophage | 11 studies | 29% ± 13% | |
B cell | 10 studies | 24% ± 6% | |
oligodendrocyte precursor cell | 10 studies | 39% ± 15% | |
ciliated cell | 10 studies | 28% ± 10% | |
GABAergic neuron | 9 studies | 46% ± 21% | |
glutamatergic neuron | 9 studies | 47% ± 24% | |
epithelial cell | 9 studies | 39% ± 20% | |
basal cell | 9 studies | 34% ± 17% | |
adipocyte | 9 studies | 30% ± 8% | |
T cell | 8 studies | 22% ± 5% | |
smooth muscle cell | 8 studies | 24% ± 6% | |
endothelial cell of lymphatic vessel | 7 studies | 27% ± 10% | |
neuron | 7 studies | 46% ± 21% | |
type I pneumocyte | 7 studies | 26% ± 9% | |
natural killer cell | 6 studies | 20% ± 3% | |
interneuron | 6 studies | 49% ± 18% | |
club cell | 6 studies | 30% ± 8% | |
retina horizontal cell | 6 studies | 22% ± 5% | |
retinal cone cell | 6 studies | 23% ± 4% | |
dendritic cell | 6 studies | 23% ± 7% | |
myeloid cell | 5 studies | 21% ± 3% | |
cardiac muscle cell | 5 studies | 20% ± 4% | |
respiratory goblet cell | 5 studies | 29% ± 10% | |
monocyte | 5 studies | 24% ± 6% | |
type II pneumocyte | 5 studies | 26% ± 8% | |
granule cell | 4 studies | 29% ± 8% | |
amacrine cell | 4 studies | 24% ± 8% | |
retinal bipolar neuron | 4 studies | 19% ± 4% | |
retinal pigment epithelial cell | 4 studies | 35% ± 18% | |
CD4-positive, alpha-beta T cell | 4 studies | 16% ± 2% | |
mesothelial cell | 4 studies | 29% ± 10% | |
lymphocyte | 4 studies | 31% ± 10% | |
Mueller cell | 4 studies | 23% ± 4% | |
retinal rod cell | 4 studies | 27% ± 4% | |
goblet cell | 4 studies | 35% ± 21% | |
hematopoietic precursor cell | 3 studies | 25% ± 6% | |
abnormal cell | 3 studies | 33% ± 21% | |
GABAergic interneuron | 3 studies | 32% ± 6% | |
glial cell | 3 studies | 30% ± 9% | |
progenitor cell | 3 studies | 32% ± 5% | |
retinal ganglion cell | 3 studies | 19% ± 2% | |
brush cell | 3 studies | 27% ± 5% | |
effector memory CD8-positive, alpha-beta T cell | 3 studies | 18% ± 2% | |
mononuclear phagocyte | 3 studies | 21% ± 0% | |
GABAergic amacrine cell | 3 studies | 23% ± 4% | |
ON-bipolar cell | 3 studies | 21% ± 4% | |
glycinergic amacrine cell | 3 studies | 25% ± 6% | |
rod bipolar cell | 3 studies | 23% ± 4% | |
hepatocyte | 3 studies | 39% ± 16% | |
CD8-positive, alpha-beta T cell | 3 studies | 17% ± 2% | |
connective tissue cell | 3 studies | 26% ± 4% | |
ependymal cell | 3 studies | 44% ± 16% | |
enteroendocrine cell | 3 studies | 26% ± 8% | |
leukocyte | 3 studies | 28% ± 9% | |
myofibroblast cell | 3 studies | 31% ± 9% | |
alveolar macrophage | 3 studies | 27% ± 8% | |
chondrocyte | 3 studies | 23% ± 4% | |
transit amplifying cell | 3 studies | 43% ± 30% | |
mural cell | 3 studies | 31% ± 12% | |
mucus secreting cell | 3 studies | 25% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 6551.57 | 21 / 21 | 100% | 54.76 | 504 / 504 |
esophagus | 100% | 5554.47 | 1445 / 1445 | 100% | 66.56 | 183 / 183 |
lung | 100% | 5277.63 | 578 / 578 | 100% | 52.50 | 1155 / 1155 |
ovary | 100% | 7315.82 | 180 / 180 | 100% | 54.62 | 430 / 430 |
breast | 100% | 5938.42 | 459 / 459 | 100% | 87.35 | 1116 / 1118 |
intestine | 100% | 6035.79 | 966 / 966 | 100% | 53.03 | 526 / 527 |
prostate | 100% | 6538.46 | 245 / 245 | 100% | 54.54 | 501 / 502 |
uterus | 100% | 7159.10 | 170 / 170 | 100% | 59.27 | 458 / 459 |
brain | 100% | 4215.45 | 2634 / 2642 | 100% | 53.86 | 705 / 705 |
stomach | 100% | 4796.59 | 359 / 359 | 100% | 57.77 | 285 / 286 |
thymus | 100% | 6313.36 | 653 / 653 | 99% | 48.95 | 601 / 605 |
pancreas | 100% | 2866.52 | 327 / 328 | 99% | 40.50 | 176 / 178 |
kidney | 100% | 4284.04 | 89 / 89 | 98% | 38.90 | 884 / 901 |
adrenal gland | 100% | 5787.80 | 258 / 258 | 98% | 34.78 | 225 / 230 |
skin | 100% | 6817.01 | 1809 / 1809 | 98% | 62.24 | 461 / 472 |
liver | 100% | 2747.93 | 226 / 226 | 89% | 23.32 | 360 / 406 |
adipose | 100% | 5545.34 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 5541.18 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 36.98 | 29 / 29 |
muscle | 100% | 4277.71 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 6584.11 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 54.88 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 21.12 | 1 / 1 |
heart | 98% | 2954.82 | 842 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 39.78 | 77 / 80 |
peripheral blood | 77% | 3463.27 | 711 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0044849 | Biological process | estrous cycle |
GO_0019934 | Biological process | cGMP-mediated signaling |
GO_0010468 | Biological process | regulation of gene expression |
GO_0045773 | Biological process | positive regulation of axon extension |
GO_0010976 | Biological process | positive regulation of neuron projection development |
GO_0010629 | Biological process | negative regulation of gene expression |
GO_0090263 | Biological process | positive regulation of canonical Wnt signaling pathway |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0050805 | Biological process | negative regulation of synaptic transmission |
GO_0051402 | Biological process | neuron apoptotic process |
GO_0001933 | Biological process | negative regulation of protein phosphorylation |
GO_0030182 | Biological process | neuron differentiation |
GO_0033484 | Biological process | intracellular nitric oxide homeostasis |
GO_0050731 | Biological process | positive regulation of peptidyl-tyrosine phosphorylation |
GO_0009743 | Biological process | response to carbohydrate |
GO_0043524 | Biological process | negative regulation of neuron apoptotic process |
GO_0051965 | Biological process | positive regulation of synapse assembly |
GO_0007614 | Biological process | short-term memory |
GO_0005615 | Cellular component | extracellular space |
GO_0043025 | Cellular component | neuronal cell body |
GO_0030425 | Cellular component | dendrite |
GO_0090575 | Cellular component | RNA polymerase II transcription regulator complex |
GO_0030424 | Cellular component | axon |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0048487 | Molecular function | beta-tubulin binding |
GO_0000977 | Molecular function | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0003682 | Molecular function | chromatin binding |
GO_0042277 | Molecular function | peptide binding |
GO_0008013 | Molecular function | beta-catenin binding |
GO_0005507 | Molecular function | copper ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | ADNP |
Protein name | Activity dependent neuroprotector homeobox Activity-dependent neuroprotector homeobox protein (Activity-dependent neuroprotective protein) Activity-dependent neuroprotector homeobox |
Synonyms | KIAA0784 ADNP1 |
Description | FUNCTION: May be involved in transcriptional regulation. May mediate some of the neuroprotective peptide VIP-associated effects involving normal growth and cancer proliferation. Positively modulates WNT-beta-catenin/CTNN1B signaling, acting by regulating phosphorylation of, and thereby stabilizing, CTNNB1. May be required for neural induction and neuronal differentiation. May be involved in erythroid differentiation (By similarity). . |
Accessions | A0A2R8YCL6 ENST00000645081.1 Q6DHZ8 ENST00000349014.8 ENST00000396029.8 Q9H2P0 ENST00000621696.5 ENST00000673732.1 A0A669KBJ7 ENST00000371602.9 A0A2R8Y6X0 ENST00000644386.1 ENST00000396032.8 |