Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 18 studies | 30% ± 13% | |
fibroblast | 16 studies | 26% ± 10% | |
astrocyte | 16 studies | 31% ± 15% | |
oligodendrocyte | 15 studies | 50% ± 17% | |
oligodendrocyte precursor cell | 14 studies | 53% ± 19% | |
glutamatergic neuron | 12 studies | 47% ± 22% | |
GABAergic neuron | 10 studies | 53% ± 23% | |
mast cell | 9 studies | 33% ± 12% | |
smooth muscle cell | 9 studies | 30% ± 10% | |
pericyte | 9 studies | 30% ± 18% | |
type I pneumocyte | 7 studies | 31% ± 11% | |
neuron | 7 studies | 49% ± 19% | |
adipocyte | 7 studies | 35% ± 8% | |
interneuron | 6 studies | 64% ± 12% | |
epithelial cell | 5 studies | 34% ± 12% | |
cardiac muscle cell | 5 studies | 30% ± 7% | |
ciliated cell | 5 studies | 28% ± 11% | |
granule cell | 4 studies | 54% ± 2% | |
endothelial cell of lymphatic vessel | 4 studies | 22% ± 2% | |
connective tissue cell | 4 studies | 20% ± 3% | |
type II pneumocyte | 4 studies | 23% ± 6% | |
capillary endothelial cell | 3 studies | 22% ± 3% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 50% ± 10% | |
GABAergic interneuron | 3 studies | 48% ± 7% | |
glial cell | 3 studies | 38% ± 20% | |
macrophage | 3 studies | 32% ± 21% | |
microglial cell | 3 studies | 41% ± 18% | |
progenitor cell | 3 studies | 61% ± 20% | |
GABAergic amacrine cell | 3 studies | 31% ± 12% | |
glycinergic amacrine cell | 3 studies | 28% ± 12% | |
endothelial cell of vascular tree | 3 studies | 27% ± 9% | |
amacrine cell | 3 studies | 45% ± 16% | |
ependymal cell | 3 studies | 34% ± 16% | |
club cell | 3 studies | 30% ± 7% | |
transit amplifying cell | 3 studies | 29% ± 14% | |
mesothelial cell | 3 studies | 33% ± 6% | |
kidney distal convoluted tubule epithelial cell | 3 studies | 33% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 5034.78 | 244 / 245 | 100% | 24.67 | 501 / 502 |
brain | 100% | 3646.49 | 2630 / 2642 | 97% | 20.63 | 686 / 705 |
ovary | 100% | 7194.42 | 180 / 180 | 96% | 13.60 | 412 / 430 |
breast | 100% | 3952.32 | 459 / 459 | 95% | 18.41 | 1065 / 1118 |
thymus | 99% | 3149.10 | 647 / 653 | 94% | 8.44 | 567 / 605 |
adrenal gland | 98% | 2049.27 | 253 / 258 | 94% | 19.05 | 216 / 230 |
pancreas | 100% | 4603.02 | 328 / 328 | 92% | 8.75 | 163 / 178 |
kidney | 99% | 2792.49 | 88 / 89 | 88% | 12.35 | 794 / 901 |
intestine | 99% | 3350.52 | 960 / 966 | 82% | 7.19 | 430 / 527 |
bladder | 100% | 3582.38 | 21 / 21 | 81% | 8.60 | 407 / 504 |
stomach | 98% | 2439.96 | 352 / 359 | 79% | 8.63 | 226 / 286 |
lung | 98% | 3379.49 | 566 / 578 | 76% | 7.63 | 881 / 1155 |
uterus | 100% | 7500.48 | 170 / 170 | 69% | 8.85 | 319 / 459 |
skin | 72% | 1790.05 | 1305 / 1809 | 94% | 25.17 | 444 / 472 |
esophagus | 88% | 2482.24 | 1275 / 1445 | 73% | 7.15 | 133 / 183 |
liver | 50% | 491.08 | 112 / 226 | 59% | 5.15 | 239 / 406 |
blood vessel | 100% | 8226.36 | 1335 / 1335 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 12.18 | 1 / 1 |
adipose | 100% | 4037.43 | 1201 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 40.73 | 79 / 80 |
heart | 98% | 2961.23 | 841 / 861 | 0% | 0 | 0 / 0 |
muscle | 83% | 1224.95 | 669 / 803 | 0% | 0 | 0 / 0 |
spleen | 61% | 747.77 | 146 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 31% | 1.58 | 14 / 45 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.11 | 1 / 29 |
peripheral blood | 0% | 1.93 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZNF704 |
Protein name | Zinc finger protein 704 |
Synonyms | |
Description | FUNCTION: Transcription factor which binds to RE2 sequence elements in the MYOD1 enhancer. . |
Accessions | Q6ZNC4 ENST00000519936.2 ENST00000327835.7 E5RGL7 |