Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| endothelial cell | 24 studies | 31% ± 14% | |
| astrocyte | 15 studies | 37% ± 16% | |
| macrophage | 14 studies | 33% ± 12% | |
| fibroblast | 13 studies | 25% ± 7% | |
| oligodendrocyte precursor cell | 12 studies | 45% ± 20% | |
| microglial cell | 9 studies | 30% ± 15% | |
| monocyte | 8 studies | 27% ± 6% | |
| non-classical monocyte | 8 studies | 23% ± 7% | |
| myeloid cell | 8 studies | 32% ± 8% | |
| adipocyte | 8 studies | 36% ± 15% | |
| mast cell | 8 studies | 25% ± 4% | |
| classical monocyte | 7 studies | 24% ± 9% | |
| endothelial cell of lymphatic vessel | 7 studies | 29% ± 12% | |
| oligodendrocyte | 7 studies | 30% ± 12% | |
| GABAergic neuron | 6 studies | 34% ± 14% | |
| neuron | 6 studies | 41% ± 16% | |
| epithelial cell | 6 studies | 31% ± 19% | |
| vein endothelial cell | 6 studies | 25% ± 11% | |
| retina horizontal cell | 6 studies | 32% ± 8% | |
| dendritic cell | 6 studies | 27% ± 11% | |
| interneuron | 5 studies | 38% ± 20% | |
| capillary endothelial cell | 5 studies | 21% ± 6% | |
| amacrine cell | 5 studies | 25% ± 6% | |
| glutamatergic neuron | 5 studies | 40% ± 17% | |
| conventional dendritic cell | 4 studies | 21% ± 5% | |
| pro-B cell | 4 studies | 34% ± 10% | |
| cardiac muscle cell | 4 studies | 27% ± 2% | |
| endothelial cell of artery | 4 studies | 21% ± 4% | |
| alveolar macrophage | 4 studies | 32% ± 16% | |
| type I pneumocyte | 4 studies | 21% ± 5% | |
| hematopoietic precursor cell | 3 studies | 22% ± 2% | |
| glial cell | 3 studies | 32% ± 11% | |
| granule cell | 3 studies | 32% ± 15% | |
| progenitor cell | 3 studies | 41% ± 12% | |
| retinal ganglion cell | 3 studies | 25% ± 11% | |
| retinal bipolar neuron | 3 studies | 17% ± 2% | |
| GABAergic amacrine cell | 3 studies | 30% ± 7% | |
| ON-bipolar cell | 3 studies | 20% ± 4% | |
| glycinergic amacrine cell | 3 studies | 25% ± 5% | |
| rod bipolar cell | 3 studies | 19% ± 2% | |
| endothelial cell of vascular tree | 3 studies | 33% ± 16% | |
| myofibroblast cell | 3 studies | 27% ± 4% | |
| abnormal cell | 3 studies | 26% ± 7% | |
| connective tissue cell | 3 studies | 17% ± 1% | |
| hematopoietic stem cell | 3 studies | 27% ± 7% | |
| smooth muscle cell | 3 studies | 25% ± 4% | |
| Schwann cell | 3 studies | 34% ± 22% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 11129.91 | 1445 / 1445 | 100% | 59.51 | 183 / 183 |
| skin | 100% | 10569.30 | 1809 / 1809 | 99% | 47.33 | 468 / 472 |
| breast | 100% | 10956.82 | 459 / 459 | 99% | 73.41 | 1107 / 1118 |
| brain | 99% | 6567.86 | 2626 / 2642 | 100% | 89.85 | 702 / 705 |
| intestine | 100% | 10075.01 | 966 / 966 | 98% | 32.83 | 518 / 527 |
| ovary | 100% | 12855.96 | 180 / 180 | 98% | 63.05 | 422 / 430 |
| thymus | 100% | 16074.17 | 653 / 653 | 98% | 58.11 | 591 / 605 |
| stomach | 100% | 8177.08 | 359 / 359 | 98% | 41.98 | 279 / 286 |
| prostate | 100% | 9353.10 | 245 / 245 | 97% | 49.43 | 489 / 502 |
| kidney | 100% | 6905.22 | 89 / 89 | 97% | 43.15 | 876 / 901 |
| lung | 100% | 10939.42 | 578 / 578 | 96% | 36.20 | 1107 / 1155 |
| bladder | 100% | 10960.81 | 21 / 21 | 96% | 33.84 | 482 / 504 |
| adrenal gland | 100% | 9552.84 | 258 / 258 | 94% | 55.86 | 217 / 230 |
| uterus | 100% | 16848.68 | 170 / 170 | 94% | 37.20 | 433 / 459 |
| pancreas | 96% | 4155.09 | 315 / 328 | 98% | 37.14 | 174 / 178 |
| liver | 81% | 2238.14 | 182 / 226 | 55% | 13.41 | 222 / 406 |
| adipose | 100% | 11256.74 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 7312.66 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| spleen | 100% | 14007.40 | 241 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 25.49 | 1 / 1 |
| heart | 100% | 7585.55 | 857 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 99% | 46.18 | 79 / 80 |
| muscle | 99% | 6654.91 | 791 / 803 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 93% | 32.27 | 42 / 45 |
| lymph node | 0% | 0 | 0 / 0 | 79% | 23.34 | 23 / 29 |
| peripheral blood | 73% | 3633.00 | 675 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0048844 | Biological process | artery morphogenesis |
| GO_0016925 | Biological process | protein sumoylation |
| GO_0048146 | Biological process | positive regulation of fibroblast proliferation |
| GO_0001701 | Biological process | in utero embryonic development |
| GO_0045582 | Biological process | positive regulation of T cell differentiation |
| GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
| GO_0001570 | Biological process | vasculogenesis |
| GO_0060395 | Biological process | SMAD protein signal transduction |
| GO_0021852 | Biological process | pyramidal neuron migration to cerebral cortex |
| GO_0007296 | Biological process | vitellogenesis |
| GO_0090398 | Biological process | cellular senescence |
| GO_0048589 | Biological process | developmental growth |
| GO_0045747 | Biological process | positive regulation of Notch signaling pathway |
| GO_0030521 | Biological process | androgen receptor signaling pathway |
| GO_0007179 | Biological process | transforming growth factor beta receptor signaling pathway |
| GO_0003007 | Biological process | heart morphogenesis |
| GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0005829 | Cellular component | cytosol |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0000785 | Cellular component | chromatin |
| GO_0005634 | Cellular component | nucleus |
| GO_0046332 | Molecular function | SMAD binding |
| GO_0061665 | Molecular function | SUMO ligase activity |
| GO_0008270 | Molecular function | zinc ion binding |
| GO_0003713 | Molecular function | transcription coactivator activity |
| GO_0030374 | Molecular function | nuclear receptor coactivator activity |
| Gene name | ZMIZ1 |
| Protein name | Zinc finger MIZ domain-containing protein 1 (PIAS-like protein Zimp10) (Retinoic acid-induced protein 17) ZMIZ1 protein |
| Synonyms | ZIMP10 RAI17 KIAA1224 |
| Description | FUNCTION: Acts as a transcriptional coactivator. Increases ligand-dependent transcriptional activity of AR and promotes AR sumoylation. The stimulation of AR activity is dependent upon sumoylation . Also functions as a transcriptional coactivator in the TGF-beta signaling pathway by increasing the activity of the SMAD3/SMAD4 transcriptional complex . Involved in transcriptional activation of a subset of NOTCH1 target genes including MYC. Involved in thymocyte and T cell development (By similarity). Involved in the regulation of postmitotic positioning of pyramidal neurons in the developing cerebral cortex . . |
| Accessions | A0JLS3 Q149N7 ENST00000334512.10 [Q9ULJ6-1] Q9ULJ6 |