Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 12 studies | 23% ± 8% | |
endothelial cell of lymphatic vessel | 8 studies | 20% ± 5% | |
plasma cell | 6 studies | 23% ± 10% | |
CD4-positive, alpha-beta T cell | 6 studies | 18% ± 2% | |
mucosal invariant T cell | 5 studies | 18% ± 3% | |
connective tissue cell | 5 studies | 29% ± 13% | |
epithelial cell | 5 studies | 36% ± 14% | |
endothelial cell | 5 studies | 27% ± 7% | |
CD8-positive, alpha-beta memory T cell | 5 studies | 17% ± 1% | |
natural killer cell | 4 studies | 16% ± 1% | |
regulatory T cell | 4 studies | 18% ± 2% | |
ciliated cell | 4 studies | 31% ± 7% | |
type B pancreatic cell | 3 studies | 36% ± 11% | |
naive thymus-derived CD4-positive, alpha-beta T cell | 3 studies | 21% ± 6% | |
pericyte | 3 studies | 20% ± 5% | |
myofibroblast cell | 3 studies | 19% ± 2% | |
macrophage | 3 studies | 17% ± 1% | |
type I pneumocyte | 3 studies | 19% ± 2% | |
GABAergic neuron | 3 studies | 26% ± 4% | |
glutamatergic neuron | 3 studies | 36% ± 7% | |
goblet cell | 3 studies | 22% ± 1% | |
gamma-delta T cell | 3 studies | 22% ± 7% | |
plasmacytoid dendritic cell | 3 studies | 21% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1818.57 | 1445 / 1445 | 100% | 38.21 | 183 / 183 |
ovary | 100% | 1552.60 | 180 / 180 | 100% | 40.56 | 430 / 430 |
breast | 100% | 2178.85 | 459 / 459 | 100% | 61.51 | 1115 / 1118 |
lung | 100% | 1897.34 | 576 / 578 | 100% | 51.64 | 1155 / 1155 |
stomach | 100% | 1776.21 | 359 / 359 | 100% | 38.59 | 285 / 286 |
uterus | 100% | 1916.31 | 170 / 170 | 100% | 44.23 | 457 / 459 |
pancreas | 100% | 2126.99 | 328 / 328 | 99% | 50.28 | 177 / 178 |
intestine | 100% | 1889.90 | 966 / 966 | 99% | 39.80 | 524 / 527 |
prostate | 100% | 1445.24 | 244 / 245 | 99% | 49.68 | 499 / 502 |
thymus | 100% | 1601.89 | 653 / 653 | 99% | 38.23 | 598 / 605 |
bladder | 100% | 1717.52 | 21 / 21 | 99% | 39.72 | 498 / 504 |
brain | 98% | 1190.68 | 2602 / 2642 | 100% | 38.56 | 704 / 705 |
skin | 100% | 3784.56 | 1809 / 1809 | 98% | 49.37 | 464 / 472 |
liver | 100% | 1241.46 | 226 / 226 | 98% | 28.67 | 399 / 406 |
kidney | 100% | 1396.75 | 89 / 89 | 98% | 50.74 | 883 / 901 |
adrenal gland | 100% | 2192.61 | 258 / 258 | 98% | 54.29 | 225 / 230 |
adipose | 100% | 2397.53 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2148.61 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 32.28 | 29 / 29 |
spleen | 100% | 1613.08 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 43.85 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 11.63 | 1 / 1 |
heart | 97% | 1120.36 | 835 / 861 | 0% | 0 | 0 / 0 |
muscle | 95% | 649.62 | 763 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 24.85 | 75 / 80 |
peripheral blood | 82% | 1128.32 | 761 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0060628 | Biological process | regulation of ER to Golgi vesicle-mediated transport |
GO_0015031 | Biological process | protein transport |
GO_0006888 | Biological process | endoplasmic reticulum to Golgi vesicle-mediated transport |
GO_0048280 | Biological process | vesicle fusion with Golgi apparatus |
GO_0030070 | Biological process | insulin processing |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0005802 | Cellular component | trans-Golgi network |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0030134 | Cellular component | COPII-coated ER to Golgi transport vesicle |
GO_0070971 | Cellular component | endoplasmic reticulum exit site |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | YIPF5 |
Protein name | Protein YIPF5 (Five-pass transmembrane protein localizing in the Golgi apparatus and the endoplasmic reticulum 5) (Smooth muscle cell-associated protein 5) (SMAP-5) (YIP1 family member 5) (YPT-interacting protein 1 A) Protein YIPF Yip1 domain family member 5 |
Synonyms | YIP1A FINGER5 PP12723 SB140 UNQ3123/PRO10275 |
Description | FUNCTION: Plays a role in transport between endoplasmic reticulum and Golgi. In pancreatic beta cells, required to transport proinsulin from endoplasmic reticulum into the Golgi . . |
Accessions | ENST00000522203.5 ENST00000519064.5 E5RHH4 E5RGR9 ENST00000513112.5 [Q969M3-2] Q969M3 ENST00000448443.6 [Q969M3-1] ENST00000274496.10 [Q969M3-1] |