VPS54 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

GO_0097719Biological processneural tissue regeneration
GO_0006941Biological processstriated muscle contraction
GO_0060052Biological processneurofilament cytoskeleton organization
GO_0001701Biological processin utero embryonic development
GO_0006622Biological processprotein targeting to lysosome
GO_0048515Biological processspermatid differentiation
GO_0061744Biological processmotor behavior
GO_0007041Biological processlysosomal transport
GO_0071393Biological processcellular response to progesterone stimulus
GO_0006874Biological processintracellular calcium ion homeostasis
GO_0070493Biological processthrombin-activated receptor signaling pathway
GO_0034394Biological processprotein localization to cell surface
GO_0007274Biological processneuromuscular synaptic transmission
GO_0048708Biological processastrocyte differentiation
GO_0010992Biological processubiquitin recycling
GO_0048873Biological processhomeostasis of number of cells within a tissue
GO_0007033Biological processvacuole organization
GO_0048812Biological processneuron projection morphogenesis
GO_0042147Biological processretrograde transport, endosome to Golgi
GO_0045047Biological processprotein targeting to ER
GO_0030149Biological processsphingolipid catabolic process
GO_0007005Biological processmitochondrion organization
GO_0014004Biological processmicroglia differentiation
GO_0022904Biological processrespiratory electron transport chain
GO_0046677Biological processresponse to antibiotic
GO_0051938Biological processL-glutamate import
GO_2000672Biological processnegative regulation of motor neuron apoptotic process
GO_0097049Biological processmotor neuron apoptotic process
GO_0006896Biological processGolgi to vacuole transport
GO_0051932Biological processsynaptic transmission, GABAergic
GO_0090119Biological processvesicle-mediated cholesterol transport
GO_0010467Biological processgene expression
GO_0006309Biological processapoptotic DNA fragmentation
GO_0048630Biological processskeletal muscle tissue growth
GO_0050881Biological processmusculoskeletal movement
GO_0150076Biological processneuroinflammatory response
GO_0051592Biological processresponse to calcium ion
GO_0040008Biological processregulation of growth
GO_0035128Biological processpost-embryonic forelimb morphogenesis
GO_0035249Biological processsynaptic transmission, glutamatergic
GO_0048471Cellular componentperinuclear region of cytoplasm
GO_0016020Cellular componentmembrane
GO_0005739Cellular componentmitochondrion
GO_0005654Cellular componentnucleoplasm
GO_0005794Cellular componentGolgi apparatus
GO_0032588Cellular componenttrans-Golgi network membrane
GO_0005802Cellular componenttrans-Golgi network
GO_0005829Cellular componentcytosol
GO_0045202Cellular componentsynapse
GO_0000938Cellular componentGARP complex
GO_0005515Molecular functionprotein binding
GO_0019905Molecular functionsyntaxin binding

IV. Literature review

[source]
Gene nameVPS54
Protein nameVacuolar protein sorting-associated protein 54 (Hepatocellular carcinoma protein 8) (Tumor antigen HOM-HCC-8) (Tumor antigen SLP-8p)
VPS54 subunit of GARP complex
SynonymsHCC8
DescriptionFUNCTION: Acts as a component of the GARP complex that is involved in retrograde transport from early and late endosomes to the trans-Golgi network (TGN). The GARP complex is required for the maintenance of the cycling of mannose 6-phosphate receptors between the TGN and endosomes, this cycling is necessary for proper lysosomal sorting of acid hydrolases such as CTSD . Within the GARP complex, required to tether the complex to the TGN. Not involved in endocytic recycling . .

AccessionsENST00000272322.9 [Q9P1Q0-1]
A0A0A0MT48
ENST00000409558.8 [Q9P1Q0-4]
ENST00000416400.1
ENST00000354504.7 [Q9P1Q0-3]
Q9P1Q0