Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 16971.70 | 2641 / 2642 | 100% | 235.31 | 705 / 705 |
thymus | 100% | 9795.05 | 653 / 653 | 100% | 118.50 | 603 / 605 |
ovary | 100% | 13324.88 | 180 / 180 | 100% | 97.85 | 428 / 430 |
prostate | 100% | 6505.88 | 244 / 245 | 99% | 49.86 | 499 / 502 |
adrenal gland | 100% | 4248.94 | 258 / 258 | 99% | 174.00 | 227 / 230 |
uterus | 100% | 9466.48 | 170 / 170 | 97% | 76.34 | 447 / 459 |
kidney | 100% | 5016.83 | 89 / 89 | 97% | 57.92 | 874 / 901 |
breast | 100% | 5000.62 | 458 / 459 | 97% | 51.63 | 1085 / 1118 |
lung | 99% | 5545.37 | 574 / 578 | 97% | 57.15 | 1117 / 1155 |
bladder | 100% | 6461.71 | 21 / 21 | 96% | 53.42 | 482 / 504 |
skin | 96% | 3042.49 | 1737 / 1809 | 100% | 116.45 | 470 / 472 |
intestine | 98% | 4961.68 | 948 / 966 | 93% | 40.33 | 492 / 527 |
esophagus | 95% | 4203.79 | 1371 / 1445 | 96% | 52.16 | 175 / 183 |
stomach | 86% | 3405.78 | 309 / 359 | 94% | 42.72 | 270 / 286 |
pancreas | 76% | 1800.91 | 249 / 328 | 98% | 60.81 | 174 / 178 |
eye | 0% | 0 | 0 / 0 | 100% | 111.75 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 76.79 | 29 / 29 |
spleen | 100% | 5559.81 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 27.65 | 1 / 1 |
blood vessel | 100% | 7979.96 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 4419.74 | 1198 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 59.60 | 42 / 45 |
heart | 93% | 4468.57 | 800 / 861 | 0% | 0 | 0 / 0 |
muscle | 92% | 2860.86 | 737 / 803 | 0% | 0 | 0 / 0 |
liver | 19% | 390.23 | 43 / 226 | 57% | 19.74 | 232 / 406 |
peripheral blood | 44% | 1576.58 | 406 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006508 | Biological process | proteolysis |
GO_0016579 | Biological process | protein deubiquitination |
GO_0005694 | Cellular component | chromosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005634 | Cellular component | nucleus |
GO_0004197 | Molecular function | cysteine-type endopeptidase activity |
GO_0001222 | Molecular function | transcription corepressor binding |
GO_0005515 | Molecular function | protein binding |
GO_0004843 | Molecular function | cysteine-type deubiquitinase activity |
Gene name | USP11 |
Protein name | Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12) Ubiquitin specific peptidase 11 Ubiquitin carboxyl-terminal hydrolase 11 (EC 3.4.19.12) (Deubiquitinating enzyme 11) (Ubiquitin thioesterase 11) (Ubiquitin-specific-processing protease 11) |
Synonyms | hCG_17279 UHX1 |
Description | FUNCTION: Protease that can remove conjugated ubiquitin from target proteins and polyubiquitin chains . Inhibits the degradation of target proteins by the proteasome . Cleaves preferentially 'Lys-6' and 'Lys-63'-linked ubiquitin chains. Has lower activity with 'Lys-11' and 'Lys-33'-linked ubiquitin chains, and extremely low activity with 'Lys-27', 'Lys-29' and 'Lys-48'-linked ubiquitin chains (in vitro) . Plays a role in the regulation of pathways leading to NF-kappa-B activation . Plays a role in the regulation of DNA repair after double-stranded DNA breaks . Acts as a chromatin regulator via its association with the Polycomb group (PcG) multiprotein PRC1-like complex; may act by deubiquitinating components of the PRC1-like complex . Promotes cell proliferation by deubiquitinating phosphorylated E2F1 . . FUNCTION: Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. . FUNCTION: Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. . FUNCTION: Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. . |
Accessions | ENST00000377080.7 C9JBP8 ENST00000377078.2 Q6P453 Q5JXD3 ENST00000377107.7 B4DGK3 G5E9A6 ENST00000218348.7 P51784 |