Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 2754.83 | 180 / 180 | 100% | 54.22 | 430 / 430 |
prostate | 100% | 2360.77 | 245 / 245 | 100% | 108.97 | 502 / 502 |
thymus | 100% | 2342.37 | 653 / 653 | 100% | 106.03 | 605 / 605 |
brain | 100% | 2601.28 | 2641 / 2642 | 100% | 92.81 | 705 / 705 |
uterus | 100% | 2339.06 | 170 / 170 | 100% | 54.02 | 458 / 459 |
stomach | 100% | 1492.28 | 359 / 359 | 100% | 43.19 | 285 / 286 |
adrenal gland | 100% | 1834.24 | 258 / 258 | 100% | 61.08 | 229 / 230 |
breast | 100% | 2005.79 | 459 / 459 | 99% | 45.32 | 1112 / 1118 |
kidney | 100% | 1582.55 | 89 / 89 | 99% | 35.93 | 896 / 901 |
intestine | 100% | 2154.68 | 966 / 966 | 99% | 46.76 | 524 / 527 |
lung | 99% | 1354.73 | 575 / 578 | 100% | 48.80 | 1154 / 1155 |
bladder | 100% | 2109.29 | 21 / 21 | 99% | 56.06 | 500 / 504 |
pancreas | 98% | 865.13 | 323 / 328 | 100% | 49.21 | 178 / 178 |
skin | 100% | 1284.54 | 1808 / 1809 | 98% | 37.29 | 463 / 472 |
liver | 98% | 1128.07 | 222 / 226 | 100% | 33.37 | 404 / 406 |
esophagus | 100% | 1791.78 | 1445 / 1445 | 97% | 27.08 | 178 / 183 |
adipose | 100% | 1912.13 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 86.90 | 29 / 29 |
spleen | 100% | 1817.85 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 37.32 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 34.96 | 1 / 1 |
blood vessel | 100% | 1983.76 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 1437.87 | 848 / 861 | 0% | 0 | 0 / 0 |
muscle | 98% | 896.80 | 783 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 33.38 | 77 / 80 |
peripheral blood | 90% | 1051.57 | 838 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005634 | Cellular component | nucleus |
Gene name | THYN1 |
Protein name | Thymocyte nuclear protein 1 (Thymocyte protein Thy28) |
Synonyms | HSPC144 THY28 MDS012 My0054 |
Description | FUNCTION: Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. . |
Accessions | ENST00000392595.6 [Q9P016-1] ENST00000392594.7 [Q9P016-1] ENST00000341541.8 [Q9P016-1] ENST00000352327.5 [Q9P016-2] Q9P016 |