THY1 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
fibroblast	26 studies	40% ± 18%	Explore
pericyte	18 studies	46% ± 22%	Explore
connective tissue cell	14 studies	41% ± 13%	Explore
endothelial cell	13 studies	32% ± 13%	Explore
myofibroblast cell	10 studies	42% ± 19%	Explore
oligodendrocyte precursor cell	10 studies	36% ± 15%	Explore
glutamatergic neuron	9 studies	54% ± 18%	Explore
smooth muscle cell	9 studies	32% ± 22%	Explore
GABAergic neuron	7 studies	40% ± 21%	Explore
neuron	6 studies	40% ± 17%	Explore
amacrine cell	5 studies	37% ± 16%	Explore
retinal ganglion cell	5 studies	81% ± 25%	Explore
adventitial cell	4 studies	36% ± 10%	Explore
GABAergic amacrine cell	3 studies	28% ± 9%	Explore
glycinergic amacrine cell	3 studies	26% ± 8%	Explore
astrocyte	3 studies	31% ± 11%	Explore
Mueller cell	3 studies	27% ± 8%	Explore
interneuron	3 studies	48% ± 17%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
brain	10 studies	34% ± 19%	Explore
intestine	5 studies	25% ± 9%	Explore
kidney	3 studies	17% ± 0%	Explore
eye	3 studies	24% ± 8%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	95%	17879.93	2516 / 2642	99%	88.62	698 / 705
thymus	80%	3504.23	521 / 653	89%	36.07	541 / 605
breast	62%	2780.52	283 / 459	97%	60.13	1083 / 1118
intestine	64%	2924.60	618 / 966	86%	39.67	454 / 527
kidney	75%	4885.71	67 / 89	70%	57.14	630 / 901
lung	44%	2028.19	255 / 578	86%	34.28	994 / 1155
bladder	52%	3720.10	11 / 21	77%	34.78	390 / 504
uterus	67%	4346.62	114 / 170	60%	29.27	276 / 459
esophagus	44%	1704.72	635 / 1445	81%	28.56	148 / 183
stomach	32%	1432.22	114 / 359	91%	44.87	259 / 286
skin	48%	7663.17	876 / 1809	74%	27.85	347 / 472
ovary	21%	698.24	37 / 180	90%	65.18	389 / 430
pancreas	10%	260.41	32 / 328	98%	87.62	174 / 178
ureter	0%	0	0 / 0	100%	12.93	1 / 1
lymph node	0%	0	0 / 0	93%	32.17	27 / 29
adrenal gland	16%	379.83	41 / 258	76%	51.26	174 / 230
prostate	45%	1525.62	111 / 245	29%	5.48	146 / 502
adipose	71%	4915.90	850 / 1204	0%	0	0 / 0
tonsil	0%	0	0 / 0	69%	22.67	31 / 45
liver	2%	56.91	5 / 226	57%	14.24	230 / 406
blood vessel	48%	1969.84	646 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	31%	5.92	25 / 80
spleen	30%	791.65	72 / 241	0%	0	0 / 0
heart	6%	211.92	54 / 861	0%	0	0 / 0
muscle	1%	38.01	8 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
peripheral blood	0%	0	0 / 929	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0050870	Biological process	positive regulation of T cell activation
GO_0001525	Biological process	angiogenesis
GO_0006469	Biological process	negative regulation of protein kinase activity
GO_0043547	Biological process	positive regulation of GTPase activity
GO_0050860	Biological process	negative regulation of T cell receptor signaling pathway
GO_2000298	Biological process	regulation of Rho-dependent protein serine/threonine kinase activity
GO_0050771	Biological process	negative regulation of axonogenesis
GO_0034113	Biological process	heterotypic cell-cell adhesion
GO_0007010	Biological process	cytoskeleton organization
GO_0050852	Biological process	T cell receptor signaling pathway
GO_0001952	Biological process	regulation of cell-matrix adhesion
GO_0007267	Biological process	cell-cell signaling
GO_0002693	Biological process	positive regulation of cellular extravasation
GO_0043113	Biological process	receptor clustering
GO_0046549	Biological process	retinal cone cell development
GO_0070571	Biological process	negative regulation of neuron projection regeneration
GO_0007229	Biological process	integrin-mediated signaling pathway
GO_0051894	Biological process	positive regulation of focal adhesion assembly
GO_0048041	Biological process	focal adhesion assembly
GO_0051281	Biological process	positive regulation of release of sequestered calcium ion into cytosol
GO_0030336	Biological process	negative regulation of cell migration
GO_0098609	Biological process	cell-cell adhesion
GO_0016324	Cellular component	apical plasma membrane
GO_0009897	Cellular component	external side of plasma membrane
GO_0005576	Cellular component	extracellular region
GO_0005886	Cellular component	plasma membrane
GO_0045121	Cellular component	membrane raft
GO_0070062	Cellular component	extracellular exosome
GO_0032809	Cellular component	neuronal cell body membrane
GO_0005925	Cellular component	focal adhesion
GO_0030425	Cellular component	dendrite
GO_0009986	Cellular component	cell surface
GO_0030673	Cellular component	axolemma
GO_0005783	Cellular component	endoplasmic reticulum
GO_0030426	Cellular component	growth cone
GO_0032590	Cellular component	dendrite membrane
GO_0034235	Molecular function	GPI anchor binding
GO_0005096	Molecular function	GTPase activator activity
GO_0005178	Molecular function	integrin binding
GO_0005515	Molecular function	protein binding

IV. Literature review

[source]

Gene name	THY1
Protein name	Thy-1 cell surface antigen Thy-1 membrane glycoprotein (Thy-1 antigen) Thy-1 membrane glycoprotein (CDw90) (Thy-1 antigen) (CD antigen CD90) Thy-1 co-transcribed protein (Thy-1 membrane glycoprotein variant 1) (cDNA, FLJ94676, Homo sapiens Thy-1 co-transcribed (LOC94105), mRNA)
Synonyms	hCG_14965
Description	FUNCTION: May play a role in cell-cell or cell-ligand interactions during synaptogenesis and other events in the brain. FUNCTION: May play a role in cell-cell or cell-ligand interactions during synaptogenesis and other events in the brain. . FUNCTION: May play a role in cell-cell or cell-ligand interactions during synaptogenesis and other events in the brain. . FUNCTION: May play a role in cell-cell or cell-ligand interactions during synaptogenesis and other events in the brain. . FUNCTION: May play a role in cell-cell or cell-ligand interactions during synaptogenesis and other events in the brain. .
Accessions	B0YJA4 J3QRJ3 P04216 ENST00000524659.1 ENST00000528295.5 Q9HBB0 ENST00000284240.10 E9PIM6 ENST00000580275.5 E9PNQ8 ENST00000528522.5 E9PIE1 ENST00000524970.5

THY1 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review