TBC1D1 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
endothelial cell	28 studies	29% ± 13%	Explore
pericyte	26 studies	29% ± 14%	Explore
smooth muscle cell	22 studies	33% ± 13%	Explore
B cell	14 studies	25% ± 9%	Explore
astrocyte	12 studies	34% ± 17%	Explore
macrophage	11 studies	29% ± 14%	Explore
microglial cell	11 studies	46% ± 15%	Explore
endothelial cell of artery	9 studies	20% ± 5%	Explore
glutamatergic neuron	9 studies	39% ± 22%	Explore
naive B cell	9 studies	20% ± 4%	Explore
non-classical monocyte	8 studies	26% ± 13%	Explore
renal alpha-intercalated cell	7 studies	46% ± 19%	Explore
myeloid cell	7 studies	31% ± 14%	Explore
oligodendrocyte precursor cell	6 studies	26% ± 11%	Explore
epithelial cell	6 studies	35% ± 7%	Explore
dendritic cell	6 studies	30% ± 11%	Explore
endothelial cell of vascular tree	6 studies	28% ± 17%	Explore
ionocyte	5 studies	35% ± 13%	Explore
classical monocyte	5 studies	26% ± 10%	Explore
CD16-negative, CD56-bright natural killer cell, human	5 studies	21% ± 4%	Explore
cardiac muscle cell	5 studies	42% ± 11%	Explore
GABAergic neuron	5 studies	38% ± 13%	Explore
monocyte	5 studies	27% ± 10%	Explore
myofibroblast cell	4 studies	27% ± 8%	Explore
neuron	4 studies	33% ± 16%	Explore
plasma cell	4 studies	34% ± 9%	Explore
retinal pigment epithelial cell	4 studies	46% ± 18%	Explore
CD4-positive, alpha-beta T cell	4 studies	19% ± 2%	Explore
lymphocyte	4 studies	33% ± 11%	Explore
endothelial cell of lymphatic vessel	4 studies	24% ± 8%	Explore
muscle cell	4 studies	46% ± 24%	Explore
CD8-positive, alpha-beta T cell	4 studies	19% ± 3%	Explore
capillary endothelial cell	4 studies	25% ± 6%	Explore
natural killer cell	4 studies	19% ± 2%	Explore
fibroblast	4 studies	31% ± 7%	Explore
interneuron	4 studies	35% ± 13%	Explore
effector memory CD8-positive, alpha-beta T cell	3 studies	20% ± 3%	Explore
hematopoietic precursor cell	3 studies	24% ± 4%	Explore
glomerular endothelial cell	3 studies	19% ± 2%	Explore
precursor B cell	3 studies	36% ± 4%	Explore
immature B cell	3 studies	29% ± 8%	Explore
mesothelial cell	3 studies	58% ± 30%	Explore
mononuclear phagocyte	3 studies	26% ± 3%	Explore
vein endothelial cell	3 studies	31% ± 17%	Explore
germinal center B cell	3 studies	18% ± 2%	Explore
T cell	3 studies	20% ± 3%	Explore
hepatocyte	3 studies	36% ± 15%	Explore
ependymal cell	3 studies	32% ± 13%	Explore
leukocyte	3 studies	32% ± 9%	Explore
alveolar macrophage	3 studies	26% ± 6%	Explore
transit amplifying cell	3 studies	26% ± 12%	Explore
CD8-positive, alpha-beta memory T cell	3 studies	19% ± 4%	Explore
renal principal cell	3 studies	34% ± 14%	Explore
abnormal cell	3 studies	20% ± 5%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
brain	11 studies	32% ± 15%	Explore
lung	4 studies	19% ± 2%	Explore
heart	4 studies	29% ± 5%	Explore
peripheral blood	3 studies	27% ± 5%	Explore
kidney	3 studies	31% ± 5%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
kidney	100%	12318.61	89 / 89	100%	48.95	901 / 901
thymus	100%	8408.25	653 / 653	100%	44.20	604 / 605
bladder	100%	9662.90	21 / 21	99%	29.57	498 / 504
breast	100%	3946.76	459 / 459	99%	26.15	1104 / 1118
intestine	100%	16143.16	965 / 966	98%	20.84	519 / 527
uterus	99%	23041.24	168 / 170	99%	30.40	454 / 459
ovary	98%	4216.69	176 / 180	98%	20.82	420 / 430
lung	99%	5359.47	572 / 578	96%	17.15	1110 / 1155
prostate	99%	5110.63	243 / 245	96%	16.98	480 / 502
brain	89%	2249.57	2350 / 2642	97%	18.98	685 / 705
esophagus	82%	8422.48	1186 / 1445	96%	19.77	176 / 183
stomach	74%	5787.15	264 / 359	100%	23.32	285 / 286
skin	72%	2034.99	1302 / 1809	97%	24.22	460 / 472
pancreas	67%	1560.34	221 / 328	99%	32.29	177 / 178
liver	77%	1632.03	174 / 226	87%	13.46	355 / 406
adrenal gland	29%	517.54	74 / 258	91%	13.28	209 / 230
blood vessel	100%	12607.32	1335 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	77.98	29 / 29
muscle	100%	9008.34	803 / 803	0%	0	0 / 0
spleen	100%	6167.55	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	23.67	45 / 45
ureter	0%	0	0 / 0	100%	43.80	1 / 1
adipose	100%	4982.01	1201 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	99%	33.07	79 / 80
heart	97%	6417.74	836 / 861	0%	0	0 / 0
peripheral blood	96%	5285.54	895 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_1902017	Biological process	regulation of cilium assembly
GO_0090630	Biological process	activation of GTPase activity
GO_0005634	Cellular component	nucleus
GO_0005515	Molecular function	protein binding
GO_0005096	Molecular function	GTPase activator activity

IV. Literature review

[source]

Gene name	TBC1D1
Protein name	TBC1D1 protein TBC1 domain family, member 1 TBC1 domain family member 1
Synonyms	KIAA1108
Description	FUNCTION: May act as a GTPase-activating protein for Rab family protein(s). May play a role in the cell cycle and differentiation of various tissues. Involved in the trafficking and translocation of GLUT4-containing vesicles and insulin-stimulated glucose uptake into cells (By similarity). .
Accessions	ENST00000421339.3 ENST00000508802.5 [Q86TI0-2] H0YA01 Q7Z6H2 ENST00000510573.6 B5MCJ2 H0Y8P0 ENST00000443855.5 ENST00000446803.6 ENST00000261439.9 [Q86TI0-1] ENST00000698857.1 Q6PJJ8 C9JIE2 B9A6J6 H7C0Z7 ENST00000513936.6 H7C380 ENST00000402522.1 A0A8V8TNS9 A0JNU9 Q86TI0

TBC1D1 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review