Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 35 studies | 42% ± 19% | |
astrocyte | 18 studies | 33% ± 14% | |
pericyte | 17 studies | 31% ± 16% | |
oligodendrocyte precursor cell | 16 studies | 47% ± 21% | |
oligodendrocyte | 15 studies | 40% ± 15% | |
microglial cell | 13 studies | 36% ± 16% | |
fibroblast | 12 studies | 36% ± 16% | |
endothelial cell of lymphatic vessel | 10 studies | 49% ± 17% | |
smooth muscle cell | 10 studies | 34% ± 11% | |
adipocyte | 9 studies | 25% ± 4% | |
type I pneumocyte | 8 studies | 41% ± 19% | |
epithelial cell | 8 studies | 35% ± 22% | |
retinal ganglion cell | 6 studies | 76% ± 20% | |
retina horizontal cell | 6 studies | 65% ± 20% | |
capillary endothelial cell | 6 studies | 34% ± 17% | |
cardiac muscle cell | 6 studies | 60% ± 23% | |
ciliated cell | 6 studies | 23% ± 10% | |
Mueller cell | 6 studies | 54% ± 24% | |
interneuron | 5 studies | 22% ± 4% | |
endothelial cell of artery | 5 studies | 26% ± 8% | |
vein endothelial cell | 5 studies | 40% ± 25% | |
basal cell | 5 studies | 41% ± 25% | |
club cell | 5 studies | 40% ± 13% | |
type II pneumocyte | 5 studies | 43% ± 9% | |
GABAergic neuron | 4 studies | 41% ± 6% | |
myofibroblast cell | 4 studies | 36% ± 17% | |
amacrine cell | 4 studies | 37% ± 11% | |
respiratory goblet cell | 4 studies | 42% ± 22% | |
endothelial cell of vascular tree | 4 studies | 46% ± 20% | |
mast cell | 4 studies | 26% ± 8% | |
hepatic stellate cell | 3 studies | 49% ± 16% | |
glomerular endothelial cell | 3 studies | 18% ± 1% | |
glial cell | 3 studies | 28% ± 13% | |
squamous epithelial cell | 3 studies | 39% ± 20% | |
mesothelial cell | 3 studies | 34% ± 8% | |
glycinergic amacrine cell | 3 studies | 35% ± 12% | |
retinal pigment epithelial cell | 3 studies | 37% ± 27% | |
abnormal cell | 3 studies | 30% ± 10% | |
neural progenitor cell | 3 studies | 35% ± 8% | |
ependymal cell | 3 studies | 37% ± 17% | |
goblet cell | 3 studies | 42% ± 28% | |
granule cell | 3 studies | 31% ± 17% | |
glutamatergic neuron | 3 studies | 33% ± 11% | |
mucus secreting cell | 3 studies | 45% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 5506.62 | 1445 / 1445 | 100% | 19.34 | 183 / 183 |
lung | 100% | 8844.36 | 578 / 578 | 99% | 13.93 | 1147 / 1155 |
intestine | 100% | 5049.94 | 966 / 966 | 98% | 9.93 | 519 / 527 |
skin | 100% | 9149.48 | 1809 / 1809 | 98% | 19.72 | 462 / 472 |
prostate | 100% | 4359.47 | 244 / 245 | 98% | 15.60 | 492 / 502 |
stomach | 99% | 3133.51 | 357 / 359 | 97% | 11.12 | 277 / 286 |
ovary | 100% | 3783.28 | 180 / 180 | 96% | 9.26 | 414 / 430 |
breast | 100% | 6138.35 | 459 / 459 | 96% | 12.95 | 1070 / 1118 |
uterus | 100% | 6461.45 | 170 / 170 | 96% | 11.69 | 439 / 459 |
bladder | 100% | 4503.95 | 21 / 21 | 93% | 8.81 | 468 / 504 |
thymus | 100% | 6066.47 | 653 / 653 | 93% | 18.56 | 560 / 605 |
kidney | 100% | 3426.49 | 89 / 89 | 90% | 9.43 | 812 / 901 |
pancreas | 93% | 1773.33 | 306 / 328 | 95% | 10.08 | 169 / 178 |
brain | 72% | 1411.48 | 1898 / 2642 | 99% | 17.82 | 700 / 705 |
adrenal gland | 100% | 3898.33 | 258 / 258 | 70% | 4.39 | 161 / 230 |
adipose | 100% | 5509.33 | 1204 / 1204 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.84 | 1 / 1 |
blood vessel | 100% | 6150.17 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 97% | 5709.53 | 836 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 13.67 | 43 / 45 |
liver | 60% | 1043.08 | 136 / 226 | 35% | 2.16 | 142 / 406 |
spleen | 95% | 2122.66 | 228 / 241 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 76% | 6.88 | 61 / 80 |
muscle | 41% | 577.22 | 331 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 17% | 1.50 | 5 / 29 |
peripheral blood | 2% | 29.17 | 15 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0097062 | Biological process | dendritic spine maintenance |
GO_0007520 | Biological process | myoblast fusion |
GO_0008542 | Biological process | visual learning |
GO_0099175 | Biological process | regulation of postsynapse organization |
GO_0098978 | Cellular component | glutamatergic synapse |
GO_0043679 | Cellular component | axon terminus |
GO_0043025 | Cellular component | neuronal cell body |
GO_0014069 | Cellular component | postsynaptic density |
GO_0030425 | Cellular component | dendrite |
GO_0005515 | Molecular function | protein binding |
Gene name | TANC1 |
Protein name | TANC1 protein Protein TANC1 (Tetratricopeptide repeat, ankyrin repeat and coiled-coil domain-containing protein 1) |
Synonyms | KIAA1728 |
Description | FUNCTION: May be a scaffold component in the postsynaptic density. . |
Accessions | B9EK39 ENST00000263635.8 [Q9C0D5-1] Q9C0D5 |