Name | Number of supported studies | Average coverage | |
---|---|---|---|
regulatory T cell | 18 studies | 29% ± 7% | |
oligodendrocyte | 6 studies | 25% ± 8% | |
microglial cell | 5 studies | 21% ± 5% | |
interneuron | 5 studies | 30% ± 20% | |
epithelial cell | 4 studies | 26% ± 5% | |
type II pneumocyte | 4 studies | 22% ± 6% | |
mast cell | 4 studies | 24% ± 7% | |
erythrocyte | 4 studies | 46% ± 18% | |
macrophage | 4 studies | 18% ± 3% | |
endothelial cell | 3 studies | 26% ± 10% | |
CD16-negative, CD56-bright natural killer cell, human | 3 studies | 20% ± 4% | |
ciliated cell | 3 studies | 20% ± 1% | |
gamma-delta T cell | 3 studies | 22% ± 3% | |
GABAergic neuron | 3 studies | 36% ± 12% | |
glutamatergic neuron | 3 studies | 41% ± 16% | |
oligodendrocyte precursor cell | 3 studies | 23% ± 10% | |
megakaryocyte-erythroid progenitor cell | 3 studies | 30% ± 10% | |
type I pneumocyte | 3 studies | 24% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1267.53 | 1445 / 1445 | 100% | 26.92 | 183 / 183 |
lung | 100% | 1616.74 | 578 / 578 | 100% | 22.64 | 1155 / 1155 |
ovary | 100% | 1400.33 | 180 / 180 | 100% | 18.48 | 430 / 430 |
breast | 100% | 1345.56 | 459 / 459 | 100% | 25.63 | 1116 / 1118 |
bladder | 100% | 1210.90 | 21 / 21 | 100% | 19.26 | 503 / 504 |
thymus | 100% | 1066.98 | 653 / 653 | 100% | 27.77 | 603 / 605 |
stomach | 100% | 1214.52 | 359 / 359 | 100% | 20.69 | 285 / 286 |
brain | 100% | 1612.66 | 2632 / 2642 | 100% | 26.28 | 705 / 705 |
intestine | 100% | 1082.84 | 966 / 966 | 100% | 19.76 | 525 / 527 |
uterus | 100% | 1305.85 | 170 / 170 | 100% | 18.98 | 457 / 459 |
pancreas | 100% | 820.58 | 328 / 328 | 99% | 17.97 | 177 / 178 |
prostate | 100% | 1055.90 | 244 / 245 | 100% | 19.96 | 501 / 502 |
skin | 100% | 1684.45 | 1809 / 1809 | 99% | 42.87 | 468 / 472 |
adrenal gland | 100% | 1816.60 | 258 / 258 | 99% | 21.91 | 228 / 230 |
kidney | 100% | 991.79 | 89 / 89 | 99% | 18.18 | 890 / 901 |
liver | 96% | 509.54 | 216 / 226 | 89% | 9.25 | 362 / 406 |
adipose | 100% | 1465.77 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1336.29 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 59.09 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 13.42 | 29 / 29 |
spleen | 100% | 968.10 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 19.67 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.63 | 1 / 1 |
muscle | 100% | 1993.96 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 96% | 1338.13 | 823 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 92% | 796.08 | 854 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007165 | Biological process | signal transduction |
GO_1903551 | Biological process | regulation of extracellular exosome assembly |
GO_0016236 | Biological process | macroautophagy |
GO_0036258 | Biological process | multivesicular body assembly |
GO_1903543 | Biological process | positive regulation of exosomal secretion |
GO_0043328 | Biological process | protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway |
GO_0090148 | Biological process | membrane fission |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0031901 | Cellular component | early endosome membrane |
GO_0005829 | Cellular component | cytosol |
GO_0033565 | Cellular component | ESCRT-0 complex |
GO_0043130 | Molecular function | ubiquitin binding |
GO_0005515 | Molecular function | protein binding |
GO_0035091 | Molecular function | phosphatidylinositol binding |
GO_0044389 | Molecular function | ubiquitin-like protein ligase binding |
Gene name | STAM |
Protein name | Signal transducing adapter molecule 1 (STAM-1) Signal transducing adaptor molecule |
Synonyms | STAM1 |
Description | FUNCTION: Involved in intracellular signal transduction mediated by cytokines and growth factors. Upon IL-2 and GM-CSL stimulation, it plays a role in signaling leading to DNA synthesis and MYC induction. May also play a role in T-cell development. Involved in down-regulation of receptor tyrosine kinase via multivesicular body (MVBs) when complexed with HGS (ESCRT-0 complex). The ESCRT-0 complex binds ubiquitin and acts as a sorting machinery that recognizes ubiquitinated receptors and transfers them to further sequential lysosomal sorting/trafficking processes.; FUNCTION: (Microbial infection) Plays an important role in Dengue virus entry. . FUNCTION: Involved in intracellular signal transduction mediated by cytokines and growth factors. Upon IL-2 and GM-CSL stimulation, it plays a role in signaling leading to DNA synthesis and MYC induction. May also play a role in T-cell development. Involved in down-regulation of receptor tyrosine kinase via multivesicular body (MVBs) when complexed with HGS (ESCRT-0 complex). The ESCRT-0 complex binds ubiquitin and acts as a sorting machinery that recognizes ubiquitinated receptors and transfers them to further sequential lysosomal sorting/trafficking processes. . |
Accessions | Q92783 C9J1E5 ENST00000377524.8 [Q92783-1] ENST00000377500.1 A6NMU3 ENST00000445846.1 |