SRM report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
fibroblast	19 studies	25% ± 10%	Explore
plasma cell	14 studies	36% ± 15%	Explore
smooth muscle cell	10 studies	20% ± 5%	Explore
endothelial cell	10 studies	25% ± 12%	Explore
pericyte	9 studies	20% ± 5%	Explore
connective tissue cell	9 studies	27% ± 7%	Explore
basal cell	9 studies	25% ± 7%	Explore
plasmablast	8 studies	55% ± 19%	Explore
B cell	7 studies	25% ± 5%	Explore
CD8-positive, alpha-beta T cell	7 studies	25% ± 9%	Explore
abnormal cell	6 studies	23% ± 8%	Explore
myofibroblast cell	6 studies	20% ± 3%	Explore
epithelial cell	6 studies	31% ± 12%	Explore
endothelial cell of vascular tree	6 studies	22% ± 3%	Explore
plasmacytoid dendritic cell	6 studies	18% ± 3%	Explore
CD4-positive, alpha-beta T cell	5 studies	28% ± 10%	Explore
conventional dendritic cell	5 studies	30% ± 19%	Explore
neuron	5 studies	29% ± 17%	Explore
IgG plasma cell	5 studies	22% ± 5%	Explore
endothelial cell of lymphatic vessel	5 studies	25% ± 8%	Explore
hematopoietic precursor cell	4 studies	32% ± 14%	Explore
IgA plasma cell	4 studies	24% ± 7%	Explore
gamma-delta T cell	4 studies	27% ± 13%	Explore
glutamatergic neuron	4 studies	30% ± 11%	Explore
oligodendrocyte precursor cell	4 studies	29% ± 6%	Explore
T cell	3 studies	22% ± 5%	Explore
naive B cell	3 studies	17% ± 1%	Explore
CD16-negative, CD56-bright natural killer cell, human	3 studies	22% ± 3%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	3 studies	21% ± 5%	Explore
neural crest cell	3 studies	25% ± 5%	Explore
vein endothelial cell	3 studies	19% ± 3%	Explore
capillary endothelial cell	3 studies	18% ± 3%	Explore
adventitial cell	3 studies	28% ± 4%	Explore
ciliated cell	3 studies	23% ± 5%	Explore
mesothelial cell	3 studies	30% ± 16%	Explore
macrophage	3 studies	22% ± 4%	Explore
dendritic cell	3 studies	37% ± 21%	Explore
natural killer cell	3 studies	24% ± 4%	Explore
granulocyte monocyte progenitor cell	3 studies	27% ± 9%	Explore
intestinal crypt stem cell	3 studies	19% ± 2%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	7 studies	23% ± 7%	Explore
peripheral blood	4 studies	28% ± 8%	Explore
brain	4 studies	27% ± 6%	Explore
pancreas	3 studies	21% ± 3%	Explore
placenta	3 studies	18% ± 3%	Explore
breast	3 studies	18% ± 2%	Explore
liver	3 studies	31% ± 13%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	3134.37	1445 / 1445	100%	226.46	183 / 183
ovary	100%	3244.55	180 / 180	100%	199.18	430 / 430
uterus	100%	3487.34	170 / 170	100%	172.69	459 / 459
skin	100%	4508.82	1808 / 1809	100%	356.22	472 / 472
brain	100%	3123.75	2636 / 2642	100%	142.04	705 / 705
prostate	100%	3050.80	245 / 245	99%	148.07	498 / 502
thymus	100%	2112.65	651 / 653	99%	74.76	601 / 605
pancreas	100%	5831.14	328 / 328	99%	97.49	176 / 178
stomach	100%	2547.72	358 / 359	99%	181.80	283 / 286
breast	100%	3702.36	459 / 459	98%	122.31	1098 / 1118
intestine	99%	2656.62	959 / 966	99%	168.38	521 / 527
bladder	100%	4302.52	21 / 21	97%	162.09	491 / 504
lung	99%	3154.71	575 / 578	98%	130.18	1131 / 1155
adrenal gland	100%	3667.54	258 / 258	97%	93.39	224 / 230
liver	100%	2460.39	225 / 226	98%	91.29	397 / 406
kidney	99%	2100.12	88 / 89	94%	68.68	848 / 901
adipose	100%	3893.62	1204 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	100%	261.91	80 / 80
lymph node	0%	0	0 / 0	100%	259.21	29 / 29
muscle	100%	4072.09	803 / 803	0%	0	0 / 0
spleen	100%	3905.01	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	136.80	45 / 45
ureter	0%	0	0 / 0	100%	225.38	1 / 1
blood vessel	100%	3604.26	1332 / 1335	0%	0	0 / 0
heart	99%	3115.72	855 / 861	0%	0	0 / 0
peripheral blood	74%	2407.49	686 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0