Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 4 studies | 27% ± 9% | |
GABAergic neuron | 3 studies | 19% ± 1% | |
oligodendrocyte precursor cell | 3 studies | 21% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 22% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 997.44 | 2613 / 2642 | 89% | 14.06 | 627 / 705 |
pancreas | 43% | 76.10 | 142 / 328 | 3% | 0.47 | 5 / 178 |
adrenal gland | 0% | 0.55 | 1 / 258 | 15% | 1.04 | 34 / 230 |
breast | 7% | 14.11 | 30 / 459 | 5% | 0.67 | 61 / 1118 |
skin | 3% | 6.80 | 58 / 1809 | 7% | 0.46 | 35 / 472 |
blood vessel | 5% | 12.56 | 65 / 1335 | 0% | 0 | 0 / 0 |
lung | 0% | 0 | 0 / 578 | 4% | 0.13 | 42 / 1155 |
esophagus | 0% | 0.97 | 5 / 1445 | 3% | 0.22 | 6 / 183 |
uterus | 2% | 1.86 | 3 / 170 | 2% | 0.06 | 8 / 459 |
liver | 0% | 0 | 0 / 226 | 2% | 0.06 | 10 / 406 |
bladder | 0% | 0 | 0 / 21 | 2% | 0.16 | 12 / 504 |
kidney | 0% | 0 | 0 / 89 | 2% | 0.13 | 21 / 901 |
stomach | 0% | 0.26 | 1 / 359 | 1% | 0.03 | 3 / 286 |
eye | 0% | 0 | 0 / 0 | 1% | 0.05 | 1 / 80 |
prostate | 1% | 2.28 | 2 / 245 | 0% | 0.00 | 2 / 502 |
ovary | 0% | 0 | 0 / 180 | 1% | 0.01 | 3 / 430 |
thymus | 0% | 0 | 0 / 653 | 1% | 0.17 | 4 / 605 |
intestine | 0% | 0.20 | 2 / 966 | 0% | 0.04 | 2 / 527 |
adipose | 0% | 0.47 | 5 / 1204 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007409 | Biological process | axonogenesis |
GO_0042592 | Biological process | homeostatic process |
GO_0035264 | Biological process | multicellular organism growth |
GO_0007416 | Biological process | synapse assembly |
GO_0099560 | Biological process | synaptic membrane adhesion |
GO_0050772 | Biological process | positive regulation of axonogenesis |
GO_1905606 | Biological process | regulation of presynapse assembly |
GO_0051965 | Biological process | positive regulation of synapse assembly |
GO_0030534 | Biological process | adult behavior |
GO_0098978 | Cellular component | glutamatergic synapse |
GO_0098982 | Cellular component | GABA-ergic synapse |
GO_0098839 | Cellular component | postsynaptic density membrane |
GO_0045202 | Cellular component | synapse |
GO_0005576 | Cellular component | extracellular region |
GO_0005886 | Cellular component | plasma membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | SLITRK1 |
Protein name | SLIT and NTRK-like protein 1 (Leucine-rich repeat-containing protein 12) |
Synonyms | LRRC12 UNQ233/PRO266 KIAA1910 |
Description | FUNCTION: It is involved in synaptogenesis and promotes excitatory synapse differentiation . Enhances neuronal dendrite outgrowth . . |
Accessions | ENST00000377084.3 Q96PX8 ENST00000674365.1 |