Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 12 studies | 29% ± 13% | |
mast cell | 12 studies | 25% ± 11% | |
oligodendrocyte | 10 studies | 31% ± 10% | |
microglial cell | 9 studies | 30% ± 11% | |
myeloid cell | 7 studies | 28% ± 9% | |
ciliated cell | 7 studies | 25% ± 7% | |
astrocyte | 6 studies | 25% ± 8% | |
oligodendrocyte precursor cell | 6 studies | 29% ± 12% | |
endothelial cell | 5 studies | 26% ± 11% | |
epithelial cell | 5 studies | 36% ± 14% | |
club cell | 5 studies | 21% ± 5% | |
type II pneumocyte | 4 studies | 21% ± 5% | |
GABAergic neuron | 4 studies | 39% ± 14% | |
glutamatergic neuron | 4 studies | 45% ± 18% | |
alveolar macrophage | 3 studies | 33% ± 11% | |
basal cell | 3 studies | 25% ± 5% | |
goblet cell | 3 studies | 33% ± 13% | |
transit amplifying cell | 3 studies | 22% ± 7% | |
renal principal cell | 3 studies | 22% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 6175.87 | 578 / 578 | 100% | 27.21 | 1155 / 1155 |
ovary | 100% | 2613.69 | 180 / 180 | 100% | 27.96 | 430 / 430 |
esophagus | 100% | 3367.21 | 1444 / 1445 | 100% | 25.10 | 183 / 183 |
prostate | 100% | 4750.34 | 245 / 245 | 100% | 32.17 | 501 / 502 |
brain | 100% | 3373.26 | 2636 / 2642 | 100% | 38.01 | 704 / 705 |
breast | 100% | 4274.86 | 459 / 459 | 99% | 31.89 | 1112 / 1118 |
intestine | 100% | 3170.99 | 966 / 966 | 99% | 31.67 | 524 / 527 |
stomach | 100% | 2895.63 | 359 / 359 | 99% | 27.88 | 284 / 286 |
skin | 100% | 4635.66 | 1809 / 1809 | 99% | 27.48 | 467 / 472 |
pancreas | 100% | 3418.76 | 328 / 328 | 99% | 18.63 | 176 / 178 |
bladder | 100% | 3281.43 | 21 / 21 | 99% | 23.69 | 497 / 504 |
thymus | 100% | 6479.05 | 653 / 653 | 98% | 34.17 | 594 / 605 |
uterus | 100% | 3206.86 | 170 / 170 | 98% | 20.19 | 449 / 459 |
kidney | 100% | 3647.36 | 89 / 89 | 97% | 17.29 | 876 / 901 |
adrenal gland | 100% | 3925.72 | 258 / 258 | 96% | 18.77 | 221 / 230 |
liver | 100% | 2768.20 | 226 / 226 | 90% | 12.72 | 367 / 406 |
adipose | 100% | 3338.09 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 2869.06 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 15.03 | 1 / 1 |
blood vessel | 100% | 3372.48 | 1333 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 2505.33 | 800 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 17.05 | 44 / 45 |
eye | 0% | 0 | 0 / 0 | 94% | 24.54 | 75 / 80 |
heart | 93% | 1953.53 | 801 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 63% | 834.16 | 589 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 59% | 6.30 | 17 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006828 | Biological process | manganese ion transport |
GO_0010039 | Biological process | response to iron ion |
GO_0048821 | Biological process | erythrocyte development |
GO_0006825 | Biological process | copper ion transport |
GO_0007611 | Biological process | learning or memory |
GO_0035434 | Biological process | copper ion transmembrane transport |
GO_0048813 | Biological process | dendrite morphogenesis |
GO_1902600 | Biological process | proton transmembrane transport |
GO_0034755 | Biological process | iron ion transmembrane transport |
GO_0006824 | Biological process | cobalt ion transport |
GO_0060586 | Biological process | multicellular organismal-level iron ion homeostasis |
GO_0006783 | Biological process | heme biosynthetic process |
GO_0006826 | Biological process | iron ion transport |
GO_0071421 | Biological process | manganese ion transmembrane transport |
GO_0006879 | Biological process | intracellular iron ion homeostasis |
GO_0033212 | Biological process | iron import into cell |
GO_0015692 | Biological process | lead ion transport |
GO_0035444 | Biological process | nickel cation transmembrane transport |
GO_0070574 | Biological process | cadmium ion transmembrane transport |
GO_0031526 | Cellular component | brush border membrane |
GO_0045178 | Cellular component | basal part of cell |
GO_0016324 | Cellular component | apical plasma membrane |
GO_0031902 | Cellular component | late endosome membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0031410 | Cellular component | cytoplasmic vesicle |
GO_0016020 | Cellular component | membrane |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0005739 | Cellular component | mitochondrion |
GO_0005769 | Cellular component | early endosome |
GO_0055037 | Cellular component | recycling endosome |
GO_0005773 | Cellular component | vacuole |
GO_0031901 | Cellular component | early endosome membrane |
GO_0055038 | Cellular component | recycling endosome membrane |
GO_1903561 | Cellular component | extracellular vesicle |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0070826 | Cellular component | paraferritin complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0005741 | Cellular component | mitochondrial outer membrane |
GO_0010008 | Cellular component | endosome membrane |
GO_0045177 | Cellular component | apical part of cell |
GO_0005765 | Cellular component | lysosomal membrane |
GO_0005634 | Cellular component | nucleus |
GO_0015093 | Molecular function | ferrous iron transmembrane transporter activity |
GO_0015099 | Molecular function | nickel cation transmembrane transporter activity |
GO_0015087 | Molecular function | cobalt ion transmembrane transporter activity |
GO_0015295 | Molecular function | solute:proton symporter activity |
GO_0005375 | Molecular function | copper ion transmembrane transporter activity |
GO_0046870 | Molecular function | cadmium ion binding |
GO_0015086 | Molecular function | cadmium ion transmembrane transporter activity |
GO_0005384 | Molecular function | manganese ion transmembrane transporter activity |
GO_0005381 | Molecular function | iron ion transmembrane transporter activity |
GO_0015094 | Molecular function | lead ion transmembrane transporter activity |
GO_0046915 | Molecular function | transition metal ion transmembrane transporter activity |
GO_0005515 | Molecular function | protein binding |
Gene name | SLC11A2 |
Protein name | Solute carrier family 11 (Proton-coupled divalent metal ion transporters), member 2, isoform CRA_c (cDNA FLJ46799 fis, clone TRACH3031678, highly similar to Natural resistance-associated macrophage protein 2) Natural resistance-associated macrophage protein 2 (NRAMP 2) (Divalent cation transporter 1) (Divalent metal transporter 1) (DMT-1) (Solute carrier family 11 member 2) Natural resistance-associated macrophage protein 2 isoform 2 (Solute carrier family 11 (Proton-coupled divalent metal ion transporters), member 2, isoform CRA_b) Natural resistance-associated macrophage protein 2 Solute carrier family 11 member 2 |
Synonyms | DCT1 hCG_36908 DMT1 NRAMP2 OK/SW-cl.20 |
Description | FUNCTION: Proton-coupled metal ion symporter operating with a proton to metal ion stoichiometry of 1:1 . Selectively transports various divalent metal cations, in decreasing affinity: Cd(2+) > Fe(2+) > Co(2+), Mn(2+) >> Zn(2+), Ni(2+), VO(2+) . Essential for maintenance of iron homeostasis by modulating intestinal absorption of dietary Fe(2+) and TF-associated endosomal Fe(2+) transport in erythroid precursors and other cells (By similarity). Enables Fe(2+) and Mn(2+) ion entry into mitochondria, and is thus expected to promote mitochondrial heme synthesis, iron-sulfur cluster biogenesis and antioxidant defense (By similarity). Can mediate uncoupled fluxes of either protons or metal ions. . |
Accessions | ENST00000550714.5 A0A2R8Y5L1 F8VRL7 ENST00000642227.1 ENST00000681324.1 ENST00000646988.1 ENST00000547510.5 ENST00000547579.5 A0A0H3W5U4 A0A2R8Y4F9 A0A2R8YDL2 ENST00000646740.1 A0A7P0T8E3 F8W1C0 A0A2R8Y5Q7 B3KY44 P49281 ENST00000262052.9 [P49281-2] A0A0X8GKR4 ENST00000546488.5 ENST00000549625.1 ENST00000646264.1 A0A0H3W5I8 ENST00000541174.6 [P49281-2] F8VWB0 ENST00000546743.5 ENST00000547688.7 [P49281-4] ENST00000551215.5 A0A0A1E835 A0A2R8YD71 ENST00000643884.1 ENST00000546636.5 [P49281-1] F8W154 F8W1D8 A0A0A1EL53 F8W1P7 ENST00000547732.5 F8W1F2 ENST00000547198.5 [P49281-1] ENST00000644495.1 [P49281-1] F8VR36 ENST00000548193.5 H0YIV3 ENST00000545993.7 [P49281-5] ENST00000394904.9 [P49281-3] |