Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 17 studies | 34% ± 15% | |
endothelial cell | 14 studies | 24% ± 10% | |
macrophage | 8 studies | 23% ± 4% | |
fibroblast | 7 studies | 20% ± 2% | |
astrocyte | 7 studies | 29% ± 13% | |
pericyte | 7 studies | 20% ± 5% | |
type I pneumocyte | 6 studies | 19% ± 3% | |
interneuron | 6 studies | 30% ± 21% | |
epithelial cell | 6 studies | 35% ± 14% | |
oligodendrocyte precursor cell | 6 studies | 27% ± 11% | |
microglial cell | 5 studies | 24% ± 5% | |
adipocyte | 5 studies | 19% ± 4% | |
GABAergic neuron | 5 studies | 39% ± 16% | |
glutamatergic neuron | 5 studies | 45% ± 22% | |
goblet cell | 5 studies | 27% ± 17% | |
smooth muscle cell | 4 studies | 19% ± 2% | |
classical monocyte | 4 studies | 19% ± 3% | |
neuron | 4 studies | 27% ± 7% | |
myeloid cell | 4 studies | 22% ± 4% | |
basal cell | 4 studies | 32% ± 10% | |
cardiac muscle cell | 4 studies | 19% ± 1% | |
lymphocyte | 4 studies | 20% ± 4% | |
monocyte | 4 studies | 18% ± 1% | |
endothelial cell of lymphatic vessel | 4 studies | 17% ± 2% | |
oligodendrocyte | 4 studies | 27% ± 6% | |
natural killer cell | 3 studies | 18% ± 1% | |
club cell | 3 studies | 18% ± 3% | |
retinal rod cell | 3 studies | 28% ± 7% | |
T cell | 3 studies | 21% ± 7% | |
regulatory T cell | 3 studies | 16% ± 1% | |
type II pneumocyte | 3 studies | 19% ± 3% | |
gamma-delta T cell | 3 studies | 19% ± 4% | |
mast cell | 3 studies | 16% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 4898.89 | 1445 / 1445 | 100% | 45.84 | 183 / 183 |
ovary | 100% | 2915.29 | 180 / 180 | 100% | 24.73 | 430 / 430 |
prostate | 100% | 3806.20 | 245 / 245 | 100% | 48.39 | 502 / 502 |
breast | 100% | 3439.90 | 459 / 459 | 100% | 41.99 | 1117 / 1118 |
lung | 100% | 3582.65 | 577 / 578 | 100% | 34.43 | 1155 / 1155 |
intestine | 100% | 4270.78 | 966 / 966 | 100% | 27.80 | 525 / 527 |
bladder | 100% | 5066.38 | 21 / 21 | 99% | 27.85 | 501 / 504 |
stomach | 100% | 2598.39 | 359 / 359 | 99% | 29.91 | 284 / 286 |
thymus | 100% | 2628.80 | 651 / 653 | 100% | 32.87 | 602 / 605 |
uterus | 100% | 3815.00 | 170 / 170 | 99% | 33.26 | 455 / 459 |
kidney | 100% | 2243.26 | 89 / 89 | 99% | 27.80 | 890 / 901 |
adrenal gland | 100% | 2172.22 | 257 / 258 | 98% | 16.94 | 225 / 230 |
skin | 100% | 4788.85 | 1808 / 1809 | 97% | 28.52 | 459 / 472 |
liver | 99% | 1645.59 | 224 / 226 | 95% | 16.21 | 387 / 406 |
pancreas | 95% | 1378.41 | 310 / 328 | 99% | 26.83 | 177 / 178 |
brain | 92% | 1133.22 | 2421 / 2642 | 99% | 17.10 | 699 / 705 |
adipose | 100% | 3779.42 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 6061.11 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 18.61 | 29 / 29 |
muscle | 100% | 6430.87 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1932.06 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 39.68 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 10.34 | 1 / 1 |
heart | 98% | 3298.56 | 842 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 83% | 13.25 | 66 / 80 |
peripheral blood | 82% | 1646.37 | 760 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007020 | Biological process | microtubule nucleation |
GO_0031122 | Biological process | cytoplasmic microtubule organization |
GO_0031116 | Biological process | positive regulation of microtubule polymerization |
GO_0005813 | Cellular component | centrosome |
GO_0035371 | Cellular component | microtubule plus-end |
GO_0005829 | Cellular component | cytosol |
GO_0015630 | Cellular component | microtubule cytoskeleton |
GO_0005515 | Molecular function | protein binding |
Gene name | SLAIN2 |
Protein name | HCG17415, isoform CRA_a (SLAIN2 protein) SLAIN motif family member 2 SLAIN motif-containing protein 2 |
Synonyms | KIAA1458 hCG_17415 |
Description | FUNCTION: Binds to the plus end of microtubules and regulates microtubule dynamics and microtubule organization. Promotes cytoplasmic microtubule nucleation and elongation. Required for normal structure of the microtubule cytoskeleton during interphase. . |
Accessions | ENST00000512093.5 D6RIF6 D6REM5 ENST00000510595.1 ENST00000264313.11 H0Y9L2 Q9P270 ENST00000505131.1 A0A024R9T6 |