SDF2 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
natural killer cell	18 studies	19% ± 3%	Explore
endothelial cell	14 studies	24% ± 9%	Explore
fibroblast	14 studies	23% ± 8%	Explore
CD16-positive, CD56-dim natural killer cell, human	8 studies	20% ± 4%	Explore
regulatory T cell	7 studies	18% ± 2%	Explore
CD16-negative, CD56-bright natural killer cell, human	6 studies	19% ± 3%	Explore
myofibroblast cell	6 studies	18% ± 2%	Explore
pericyte	6 studies	20% ± 4%	Explore
ciliated cell	6 studies	26% ± 8%	Explore
classical monocyte	5 studies	24% ± 7%	Explore
mature NK T cell	5 studies	17% ± 2%	Explore
connective tissue cell	5 studies	27% ± 5%	Explore
smooth muscle cell	5 studies	18% ± 3%	Explore
CD8-positive, alpha-beta T cell	5 studies	19% ± 4%	Explore
capillary endothelial cell	5 studies	17% ± 1%	Explore
plasmacytoid dendritic cell	5 studies	23% ± 7%	Explore
effector memory CD8-positive, alpha-beta T cell	4 studies	18% ± 2%	Explore
epithelial cell	4 studies	46% ± 16%	Explore
endothelial cell of vascular tree	4 studies	18% ± 1%	Explore
basal cell	4 studies	30% ± 10%	Explore
pancreatic A cell	3 studies	32% ± 5%	Explore
CD4-positive, alpha-beta T cell	3 studies	18% ± 2%	Explore
conventional dendritic cell	3 studies	30% ± 9%	Explore
exhausted T cell	3 studies	20% ± 5%	Explore
hematopoietic precursor cell	3 studies	22% ± 6%	Explore
non-classical monocyte	3 studies	32% ± 7%	Explore
endothelial cell of artery	3 studies	18% ± 2%	Explore
placental villous trophoblast	3 studies	23% ± 2%	Explore
plasma cell	3 studies	27% ± 8%	Explore
club cell	3 studies	20% ± 7%	Explore
endothelial cell of lymphatic vessel	3 studies	23% ± 7%	Explore
macrophage	3 studies	21% ± 5%	Explore
glutamatergic neuron	3 studies	23% ± 5%	Explore
dendritic cell	3 studies	33% ± 12%	Explore
enteroendocrine cell	3 studies	25% ± 13%	Explore
goblet cell	3 studies	21% ± 5%	Explore
secretory cell	3 studies	23% ± 7%	Explore
gamma-delta T cell	3 studies	27% ± 13%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	5 studies	26% ± 5%	Explore
pancreas	3 studies	33% ± 4%	Explore
peripheral blood	3 studies	24% ± 3%	Explore
intestine	3 studies	24% ± 11%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	1479.82	1445 / 1445	100%	33.78	183 / 183
liver	100%	1135.91	226 / 226	100%	33.75	406 / 406
lung	100%	1757.34	578 / 578	100%	47.91	1155 / 1155
ovary	100%	1984.49	180 / 180	100%	34.93	430 / 430
prostate	100%	1759.61	245 / 245	100%	55.83	502 / 502
stomach	100%	1344.79	359 / 359	100%	36.48	286 / 286
thymus	100%	1981.08	653 / 653	100%	64.03	604 / 605
breast	100%	1796.41	459 / 459	100%	56.63	1116 / 1118
skin	100%	1832.27	1809 / 1809	100%	40.37	471 / 472
uterus	100%	1734.79	170 / 170	100%	49.04	458 / 459
brain	100%	1119.07	2636 / 2642	100%	44.28	705 / 705
pancreas	100%	922.14	327 / 328	100%	46.37	178 / 178
intestine	100%	1701.62	966 / 966	100%	38.92	525 / 527
kidney	100%	1698.02	89 / 89	100%	36.03	897 / 901
bladder	100%	1698.24	21 / 21	99%	50.75	501 / 504
adrenal gland	100%	3063.05	258 / 258	99%	38.26	227 / 230
adipose	100%	1681.20	1204 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	100%	35.12	80 / 80
lymph node	0%	0	0 / 0	100%	40.52	29 / 29
spleen	100%	1818.41	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	38.12	45 / 45
ureter	0%	0	0 / 0	100%	33.76	1 / 1
blood vessel	100%	1582.03	1334 / 1335	0%	0	0 / 0
muscle	100%	962.26	800 / 803	0%	0	0 / 0
heart	99%	1078.22	854 / 861	0%	0	0 / 0
peripheral blood	99%	2158.36	921 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0