Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 14 studies | 28% ± 11% | |
macrophage | 12 studies | 28% ± 14% | |
microglial cell | 11 studies | 31% ± 12% | |
astrocyte | 10 studies | 40% ± 16% | |
glutamatergic neuron | 9 studies | 51% ± 25% | |
oligodendrocyte precursor cell | 9 studies | 31% ± 14% | |
adipocyte | 9 studies | 29% ± 6% | |
GABAergic neuron | 8 studies | 44% ± 24% | |
fibroblast | 8 studies | 20% ± 6% | |
oligodendrocyte | 8 studies | 30% ± 10% | |
retinal cone cell | 7 studies | 39% ± 12% | |
type I pneumocyte | 7 studies | 23% ± 8% | |
retinal rod cell | 6 studies | 31% ± 7% | |
dendritic cell | 6 studies | 22% ± 6% | |
Mueller cell | 6 studies | 53% ± 13% | |
type II pneumocyte | 6 studies | 27% ± 7% | |
myeloid cell | 5 studies | 22% ± 5% | |
epithelial cell | 5 studies | 33% ± 11% | |
amacrine cell | 5 studies | 31% ± 11% | |
retina horizontal cell | 5 studies | 26% ± 8% | |
cardiac muscle cell | 5 studies | 29% ± 6% | |
monocyte | 5 studies | 26% ± 7% | |
pericyte | 5 studies | 19% ± 3% | |
interneuron | 5 studies | 47% ± 24% | |
classical monocyte | 4 studies | 25% ± 6% | |
ciliated cell | 4 studies | 22% ± 4% | |
club cell | 4 studies | 21% ± 6% | |
GABAergic interneuron | 3 studies | 25% ± 4% | |
retinal ganglion cell | 3 studies | 31% ± 9% | |
retinal bipolar neuron | 3 studies | 25% ± 4% | |
mononuclear phagocyte | 3 studies | 21% ± 2% | |
non-classical monocyte | 3 studies | 21% ± 3% | |
OFF-bipolar cell | 3 studies | 22% ± 8% | |
glycinergic amacrine cell | 3 studies | 23% ± 5% | |
rod bipolar cell | 3 studies | 29% ± 9% | |
hepatocyte | 3 studies | 25% ± 8% | |
ependymal cell | 3 studies | 29% ± 16% | |
alveolar macrophage | 3 studies | 35% ± 8% | |
endothelial cell of lymphatic vessel | 3 studies | 18% ± 1% | |
lymphocyte | 3 studies | 18% ± 3% | |
smooth muscle cell | 3 studies | 18% ± 2% | |
neuron | 3 studies | 42% ± 9% | |
mast cell | 3 studies | 20% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2273.39 | 1445 / 1445 | 100% | 20.45 | 183 / 183 |
lung | 100% | 2447.32 | 578 / 578 | 100% | 21.71 | 1155 / 1155 |
brain | 100% | 2697.44 | 2640 / 2642 | 100% | 26.02 | 705 / 705 |
prostate | 100% | 1916.19 | 245 / 245 | 100% | 18.95 | 501 / 502 |
breast | 100% | 2356.70 | 459 / 459 | 100% | 26.71 | 1115 / 1118 |
thymus | 100% | 2265.88 | 653 / 653 | 100% | 26.53 | 602 / 605 |
bladder | 100% | 2422.14 | 21 / 21 | 99% | 18.35 | 500 / 504 |
adrenal gland | 100% | 3897.34 | 258 / 258 | 99% | 21.49 | 228 / 230 |
ovary | 100% | 2280.44 | 180 / 180 | 99% | 12.34 | 426 / 430 |
stomach | 100% | 1987.58 | 359 / 359 | 99% | 17.22 | 283 / 286 |
pancreas | 99% | 1141.06 | 326 / 328 | 99% | 14.99 | 177 / 178 |
uterus | 100% | 2337.04 | 170 / 170 | 99% | 18.22 | 453 / 459 |
kidney | 100% | 1397.27 | 89 / 89 | 99% | 17.67 | 889 / 901 |
intestine | 100% | 2329.46 | 966 / 966 | 98% | 16.62 | 519 / 527 |
skin | 100% | 3511.02 | 1809 / 1809 | 93% | 18.29 | 441 / 472 |
liver | 100% | 967.77 | 226 / 226 | 92% | 9.48 | 373 / 406 |
blood vessel | 100% | 2932.97 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 10.69 | 29 / 29 |
muscle | 100% | 2207.24 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1918.44 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 15.82 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.99 | 1 / 1 |
adipose | 100% | 2297.88 | 1203 / 1204 | 0% | 0 | 0 / 0 |
heart | 97% | 1870.99 | 834 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 93% | 1907.32 | 863 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 81% | 9.31 | 65 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0097345 | Biological process | mitochondrial outer membrane permeabilization |
GO_0047497 | Biological process | mitochondrion transport along microtubule |
GO_0007005 | Biological process | mitochondrion organization |
GO_0010821 | Biological process | regulation of mitochondrion organization |
GO_0007264 | Biological process | small GTPase-mediated signal transduction |
GO_0019725 | Biological process | cellular homeostasis |
GO_0005741 | Cellular component | mitochondrial outer membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_0016020 | Cellular component | membrane |
GO_0005525 | Molecular function | GTP binding |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
GO_0003674 | Molecular function | molecular_function |
GO_0003924 | Molecular function | GTPase activity |
Gene name | RHOT1 |
Protein name | Mitochondrial Rho GTPase 1 (MIRO-1) (hMiro-1) (EC 3.6.5.-) (Rac-GTP-binding protein-like protein) (Ras homolog gene family member T1) Mitochondrial Rho GTPase (EC 3.6.5.-) Ras homolog family member T1 |
Synonyms | hCG_1991479 ARHT1 |
Description | FUNCTION: Mitochondrial GTPase involved in mitochondrial trafficking . Probably involved in control of anterograde transport of mitochondria and their subcellular distribution . Promotes mitochondrial fission during high calcium conditions . . FUNCTION: Mitochondrial GTPase involved in mitochondrial trafficking. . |
Accessions | ENST00000358365.7 [Q8IXI2-3] ENST00000581148.1 K7EIQ7 ENST00000584692.1 ENST00000394692.6 [Q8IXI2-2] J3QSG2 ENST00000333942.10 [Q8IXI2-1] ENST00000583994.5 J3QLG2 ENST00000652713.1 K7EP86 Q8IXI2 ENST00000580392.5 ENST00000578205.5 ENST00000582602.5 J3KRG7 J3KSR5 A0A494C061 ENST00000584852.1 A0A2R8Y4I2 ENST00000354266.7 ENST00000646284.1 ENST00000545287.7 [Q8IXI2-7] ENST00000581094.5 [Q8IXI2-4] H7BXZ6 ENST00000581031.5 [Q8IXI2-5] |