Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 15 studies | 24% ± 8% | |
myofibroblast cell | 7 studies | 30% ± 10% | |
connective tissue cell | 7 studies | 31% ± 10% | |
epithelial cell | 6 studies | 30% ± 10% | |
type II pneumocyte | 6 studies | 23% ± 6% | |
pericyte | 5 studies | 25% ± 6% | |
glutamatergic neuron | 5 studies | 24% ± 6% | |
interneuron | 4 studies | 23% ± 11% | |
club cell | 4 studies | 19% ± 4% | |
basal cell | 4 studies | 27% ± 12% | |
mesothelial cell | 3 studies | 30% ± 18% | |
endothelial cell | 3 studies | 31% ± 7% | |
smooth muscle cell | 3 studies | 35% ± 17% | |
type I pneumocyte | 3 studies | 28% ± 7% | |
ciliated cell | 3 studies | 24% ± 6% | |
astrocyte | 3 studies | 19% ± 4% | |
neuron | 3 studies | 31% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 12899.38 | 180 / 180 | 100% | 64.41 | 429 / 430 |
uterus | 99% | 14062.28 | 169 / 170 | 97% | 74.96 | 447 / 459 |
thymus | 100% | 3814.16 | 653 / 653 | 96% | 55.18 | 582 / 605 |
prostate | 100% | 5525.36 | 245 / 245 | 95% | 59.40 | 479 / 502 |
lung | 100% | 5507.96 | 578 / 578 | 95% | 69.58 | 1092 / 1155 |
bladder | 100% | 3595.57 | 21 / 21 | 91% | 52.71 | 457 / 504 |
pancreas | 92% | 1352.45 | 301 / 328 | 95% | 52.65 | 169 / 178 |
skin | 100% | 6447.10 | 1809 / 1809 | 80% | 39.28 | 378 / 472 |
breast | 79% | 3034.34 | 363 / 459 | 94% | 64.00 | 1047 / 1118 |
stomach | 92% | 1351.01 | 332 / 359 | 78% | 35.80 | 224 / 286 |
intestine | 82% | 1169.32 | 794 / 966 | 82% | 37.66 | 430 / 527 |
esophagus | 61% | 1691.07 | 875 / 1445 | 92% | 59.67 | 168 / 183 |
kidney | 100% | 2708.61 | 89 / 89 | 52% | 14.63 | 467 / 901 |
brain | 34% | 353.62 | 897 / 2642 | 73% | 17.16 | 514 / 705 |
spleen | 100% | 3870.61 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 56.45 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 14.42 | 1 / 1 |
eye | 0% | 0 | 0 / 0 | 96% | 33.75 | 77 / 80 |
adrenal gland | 28% | 273.83 | 73 / 258 | 58% | 18.89 | 134 / 230 |
adipose | 75% | 1393.33 | 898 / 1204 | 0% | 0 | 0 / 0 |
heart | 41% | 492.56 | 356 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 21% | 229.23 | 286 / 1335 | 0% | 0 | 0 / 0 |
liver | 3% | 27.95 | 6 / 226 | 17% | 5.63 | 70 / 406 |
lymph node | 0% | 0 | 0 / 0 | 10% | 1.68 | 3 / 29 |
peripheral blood | 3% | 35.20 | 27 / 929 | 0% | 0 | 0 / 0 |
muscle | 0% | 0.84 | 1 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0071300 | Biological process | cellular response to retinoic acid |
GO_0060026 | Biological process | convergent extension |
GO_0045198 | Biological process | establishment of epithelial cell apical/basal polarity |
GO_0003401 | Biological process | axis elongation |
GO_0010976 | Biological process | positive regulation of neuron projection development |
GO_0090263 | Biological process | positive regulation of canonical Wnt signaling pathway |
GO_0007165 | Biological process | signal transduction |
GO_0001822 | Biological process | kidney development |
GO_0060976 | Biological process | coronary vasculature development |
GO_0003281 | Biological process | ventricular septum development |
GO_0090103 | Biological process | cochlea morphogenesis |
GO_0090179 | Biological process | planar cell polarity pathway involved in neural tube closure |
GO_0042060 | Biological process | wound healing |
GO_0030036 | Biological process | actin cytoskeleton organization |
GO_0001736 | Biological process | establishment of planar polarity |
GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
GO_0060484 | Biological process | lung-associated mesenchyme development |
GO_0050808 | Biological process | synapse organization |
GO_0060828 | Biological process | regulation of canonical Wnt signaling pathway |
GO_0016477 | Biological process | cell migration |
GO_0007411 | Biological process | axon guidance |
GO_0005886 | Cellular component | plasma membrane |
GO_0043025 | Cellular component | neuronal cell body |
GO_0005925 | Cellular component | focal adhesion |
GO_0005911 | Cellular component | cell-cell junction |
GO_0030424 | Cellular component | axon |
GO_0015026 | Molecular function | coreceptor activity |
GO_0008046 | Molecular function | axon guidance receptor activity |
GO_0004672 | Molecular function | protein kinase activity |
GO_0005524 | Molecular function | ATP binding |
GO_0005515 | Molecular function | protein binding |
Gene name | PTK7 |
Protein name | Tyrosine-protein kinase-like otk (Tyrosine-protein kinase-like 7 homolog) PTK7 protein (Protein tyrosine kinase 7 (inactive)) Inactive tyrosine-protein kinase 7 (Colon carcinoma kinase 4) (CCK-4) (Protein-tyrosine kinase 7) (Pseudo tyrosine kinase receptor 7) (Tyrosine-protein kinase-like 7) Protein tyrosine kinase 7 (inactive) |
Synonyms | CCK4 |
Description | FUNCTION: Inactive tyrosine kinase involved in Wnt signaling pathway. Component of both the non-canonical (also known as the Wnt/planar cell polarity signaling) and the canonical Wnt signaling pathway. Functions in cell adhesion, cell migration, cell polarity, proliferation, actin cytoskeleton reorganization and apoptosis. Has a role in embryogenesis, epithelial tissue organization and angiogenesis. . FUNCTION: Acts as a calcium-dependent, homophilic cell adhesion molecule that regulates neural recognition during the development of the nervous system. Component of the repulsive Plexin signaling response to regulate motor axon guidance at the embryonic stage. Also component of a receptor complex that is required in the adult visual system to innervate the lamina layer; specific targeting of R1-R6 axons. . FUNCTION: Acts as a calcium-dependent, homophilic cell adhesion molecule that regulates neural recognition during the development of the nervous system. Component of the repulsive Plexin signaling response to regulate motor axon guidance at the embryonic stage. Also component of a receptor complex that is required in the adult visual system to innervate the lamina layer; specific targeting of R1-R6 axons. . |
Accessions | ENST00000352931.6 [Q13308-4] ENST00000461389.1 ENST00000230419.9 [Q13308-1] ENST00000345201.6 [Q13308-2] C9JQR6 F8WCI7 ENST00000476760.1 Q13308 Q86X91 ENST00000481946.5 ENST00000470019.5 H7C4X3 ENST00000473339.1 ENST00000230418.8 [Q13308-5] ENST00000349241.6 [Q13308-3] ENST00000471863.5 ENST00000489707.5 ENST00000494146.5 ENST00000497957.1 H0Y889 H7C5L0 ENST00000461100.5 H0Y8F1 C9J9E8 F8WDG7 ENST00000481273.5 [Q13308-6] |