Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2094.52 | 1445 / 1445 | 96% | 2.15 | 175 / 183 |
brain | 100% | 1237.36 | 2634 / 2642 | 96% | 1.77 | 675 / 705 |
ovary | 100% | 1789.99 | 180 / 180 | 90% | 1.79 | 389 / 430 |
uterus | 100% | 2101.92 | 170 / 170 | 86% | 1.50 | 396 / 459 |
stomach | 100% | 1849.66 | 359 / 359 | 85% | 1.71 | 244 / 286 |
skin | 100% | 2814.08 | 1809 / 1809 | 85% | 1.56 | 402 / 472 |
intestine | 100% | 2063.02 | 966 / 966 | 82% | 1.88 | 431 / 527 |
bladder | 100% | 2201.48 | 21 / 21 | 80% | 1.59 | 405 / 504 |
pancreas | 100% | 1527.46 | 328 / 328 | 76% | 1.08 | 136 / 178 |
kidney | 100% | 2554.93 | 89 / 89 | 75% | 1.14 | 672 / 901 |
breast | 100% | 2246.56 | 459 / 459 | 73% | 1.15 | 820 / 1118 |
lung | 100% | 1907.93 | 578 / 578 | 73% | 1.15 | 838 / 1155 |
adrenal gland | 100% | 2372.02 | 258 / 258 | 71% | 1.06 | 163 / 230 |
thymus | 100% | 1972.58 | 653 / 653 | 65% | 1.11 | 391 / 605 |
prostate | 100% | 1877.91 | 245 / 245 | 57% | 0.77 | 286 / 502 |
liver | 100% | 1478.69 | 226 / 226 | 30% | 0.42 | 120 / 406 |
adipose | 100% | 2183.86 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 2214.73 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.10 | 1 / 1 |
blood vessel | 100% | 2098.87 | 1333 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 100% | 1765.50 | 926 / 929 | 0% | 0 | 0 / 0 |
muscle | 99% | 1132.16 | 796 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 1374.15 | 849 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 1.73 | 28 / 29 |
tonsil | 0% | 0 | 0 / 0 | 93% | 1.79 | 42 / 45 |
eye | 0% | 0 | 0 / 0 | 86% | 1.54 | 69 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006511 | Biological process | ubiquitin-dependent protein catabolic process |
GO_0070682 | Biological process | proteasome regulatory particle assembly |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_0046676 | Biological process | negative regulation of insulin secretion |
GO_0032024 | Biological process | positive regulation of insulin secretion |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0008540 | Cellular component | proteasome regulatory particle, base subcomplex |
GO_0005838 | Cellular component | proteasome regulatory particle |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0003713 | Molecular function | transcription coactivator activity |
GO_0043425 | Molecular function | bHLH transcription factor binding |
GO_0005515 | Molecular function | protein binding |
Gene name | PSMD9 |
Protein name | 26S proteasome non-ATPase regulatory subunit 9 (26S proteasome regulatory subunit p27) Proteasome 26S subunit, non-ATPase 9 |
Synonyms | |
Description | FUNCTION: Acts as a chaperone during the assembly of the 26S proteasome, specifically of the base subcomplex of the PA700/19S regulatory complex (RC). During the base subcomplex assembly is part of an intermediate PSMD9:PSMC6:PSMC3 module, also known as modulator trimer complex; PSMD9 is released during the further base assembly process. . |
Accessions | F5GX23 ENST00000535293.5 ENST00000540962.5 ENST00000261817.6 ENST00000537407.5 [O00233-2] ENST00000546333.1 ENST00000543699.5 F5H169 ENST00000542602.1 [O00233-3] O00233 J3KN29 F5H7X1 F5H5V4 ENST00000538613.5 ENST00000541212.6 [O00233-1] |