POP5 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
natural killer cell	10 studies	19% ± 5%	Explore
CD8-positive, alpha-beta T cell	10 studies	20% ± 4%	Explore
B cell	8 studies	18% ± 4%	Explore
CD16-negative, CD56-bright natural killer cell, human	7 studies	18% ± 2%	Explore
CD16-positive, CD56-dim natural killer cell, human	7 studies	18% ± 2%	Explore
plasmacytoid dendritic cell	7 studies	27% ± 7%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	6 studies	20% ± 3%	Explore
epithelial cell	6 studies	34% ± 14%	Explore
regulatory T cell	6 studies	18% ± 2%	Explore
gamma-delta T cell	6 studies	23% ± 13%	Explore
plasma cell	5 studies	24% ± 12%	Explore
CD4-positive, alpha-beta T cell	5 studies	20% ± 2%	Explore
effector memory CD8-positive, alpha-beta T cell	5 studies	18% ± 2%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	5 studies	18% ± 2%	Explore
ciliated cell	5 studies	31% ± 8%	Explore
plasmablast	4 studies	45% ± 19%	Explore
mature NK T cell	4 studies	17% ± 1%	Explore
CD4-positive, alpha-beta memory T cell	3 studies	18% ± 2%	Explore
conventional dendritic cell	3 studies	33% ± 15%	Explore
hematopoietic precursor cell	3 studies	28% ± 3%	Explore
non-classical monocyte	3 studies	24% ± 2%	Explore
endothelial cell	3 studies	21% ± 5%	Explore
T follicular helper cell	3 studies	19% ± 1%	Explore
dendritic cell	3 studies	34% ± 6%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	5 studies	20% ± 5%	Explore
lung	3 studies	26% ± 12%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
adrenal gland	100%	1821.99	258 / 258	100%	36.80	230 / 230
esophagus	100%	836.72	1445 / 1445	100%	20.93	183 / 183
liver	100%	882.75	226 / 226	100%	30.87	406 / 406
ovary	100%	752.19	180 / 180	100%	33.21	430 / 430
prostate	100%	1183.71	245 / 245	100%	36.28	502 / 502
stomach	100%	789.14	359 / 359	100%	28.77	286 / 286
thymus	100%	1330.24	653 / 653	100%	40.00	605 / 605
uterus	100%	913.93	170 / 170	100%	43.56	459 / 459
skin	100%	863.83	1808 / 1809	100%	36.85	472 / 472
kidney	100%	1443.08	89 / 89	100%	29.13	900 / 901
brain	100%	689.38	2639 / 2642	100%	42.93	705 / 705
lung	100%	812.32	577 / 578	100%	32.70	1155 / 1155
bladder	100%	983.71	21 / 21	100%	39.00	503 / 504
intestine	100%	954.37	966 / 966	100%	34.09	525 / 527
pancreas	99%	618.74	326 / 328	100%	28.92	178 / 178
breast	100%	997.96	459 / 459	99%	29.61	1110 / 1118
adipose	100%	936.87	1204 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	100%	34.00	80 / 80
lymph node	0%	0	0 / 0	100%	69.69	29 / 29
spleen	100%	1425.65	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	38.32	45 / 45
ureter	0%	0	0 / 0	100%	44.62	1 / 1
blood vessel	100%	878.39	1332 / 1335	0%	0	0 / 0
heart	99%	925.35	856 / 861	0%	0	0 / 0
muscle	98%	486.75	787 / 803	0%	0	0 / 0
peripheral blood	84%	555.75	785 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0