PMF1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
fibroblast	10 studies	21% ± 7%	Explore
natural killer cell	9 studies	20% ± 4%	Explore
B cell	8 studies	21% ± 6%	Explore
endothelial cell	8 studies	27% ± 11%	Explore
epithelial cell	6 studies	38% ± 19%	Explore
plasmacytoid dendritic cell	6 studies	21% ± 5%	Explore
pericyte	5 studies	21% ± 5%	Explore
basal cell	5 studies	29% ± 13%	Explore
non-classical monocyte	4 studies	28% ± 12%	Explore
CD4-positive, alpha-beta T cell	4 studies	22% ± 5%	Explore
myofibroblast cell	4 studies	20% ± 2%	Explore
connective tissue cell	4 studies	25% ± 8%	Explore
CD8-positive, alpha-beta T cell	4 studies	22% ± 6%	Explore
regulatory T cell	4 studies	18% ± 2%	Explore
oligodendrocyte precursor cell	4 studies	29% ± 15%	Explore
goblet cell	4 studies	23% ± 6%	Explore
pancreatic A cell	3 studies	28% ± 7%	Explore
classical monocyte	3 studies	28% ± 9%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	3 studies	22% ± 2%	Explore
conventional dendritic cell	3 studies	27% ± 12%	Explore
effector memory CD8-positive, alpha-beta T cell	3 studies	24% ± 9%	Explore
hematopoietic precursor cell	3 studies	38% ± 15%	Explore
progenitor cell	3 studies	21% ± 2%	Explore
kidney distal convoluted tubule epithelial cell	3 studies	25% ± 6%	Explore
smooth muscle cell	3 studies	26% ± 7%	Explore
astrocyte	3 studies	30% ± 10%	Explore
ciliated cell	3 studies	24% ± 1%	Explore
CD4-positive helper T cell	3 studies	18% ± 3%	Explore
endothelial cell of lymphatic vessel	3 studies	28% ± 8%	Explore
dendritic cell	3 studies	34% ± 21%	Explore
enteroendocrine cell	3 studies	28% ± 12%	Explore
intestinal crypt stem cell	3 studies	23% ± 1%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	5 studies	22% ± 6%	Explore
lung	5 studies	24% ± 6%	Explore
intestine	4 studies	23% ± 10%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
bladder	100%	2074.10	21 / 21	100%	26.33	504 / 504
esophagus	100%	1982.75	1445 / 1445	100%	23.20	183 / 183
intestine	100%	1971.53	966 / 966	100%	20.55	527 / 527
liver	100%	1661.26	226 / 226	100%	27.92	406 / 406
lung	100%	2057.80	578 / 578	100%	24.15	1155 / 1155
ovary	100%	2278.97	180 / 180	100%	38.99	430 / 430
skin	100%	2217.28	1809 / 1809	100%	21.52	472 / 472
stomach	100%	1730.43	359 / 359	100%	20.32	286 / 286
thymus	100%	2983.63	653 / 653	100%	28.89	605 / 605
uterus	100%	2449.76	170 / 170	100%	32.91	459 / 459
prostate	100%	2761.10	245 / 245	100%	24.05	501 / 502
brain	100%	1241.46	2635 / 2642	100%	21.17	705 / 705
kidney	100%	2575.01	89 / 89	100%	19.26	898 / 901
breast	100%	2304.16	459 / 459	100%	26.34	1114 / 1118
pancreas	100%	1181.91	328 / 328	99%	18.76	177 / 178
adrenal gland	100%	1979.62	258 / 258	98%	16.98	225 / 230
adipose	100%	2017.20	1204 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	100%	20.47	80 / 80
lymph node	0%	0	0 / 0	100%	39.49	29 / 29
muscle	100%	2528.03	803 / 803	0%	0	0 / 0
spleen	100%	2714.62	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	24.68	45 / 45
ureter	0%	0	0 / 0	100%	21.43	1 / 1
blood vessel	100%	1732.42	1333 / 1335	0%	0	0 / 0
peripheral blood	99%	2365.07	920 / 929	0%	0	0 / 0
heart	99%	2101.26	851 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0