Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 40 studies | 45% ± 22% | |
fibroblast | 35 studies | 43% ± 20% | |
endothelial cell | 25 studies | 45% ± 19% | |
classical monocyte | 22 studies | 34% ± 11% | |
conventional dendritic cell | 20 studies | 29% ± 14% | |
astrocyte | 19 studies | 47% ± 19% | |
microglial cell | 18 studies | 88% ± 15% | |
monocyte | 17 studies | 42% ± 26% | |
non-classical monocyte | 17 studies | 24% ± 9% | |
dendritic cell | 15 studies | 44% ± 22% | |
oligodendrocyte | 15 studies | 53% ± 20% | |
endothelial cell of lymphatic vessel | 14 studies | 40% ± 21% | |
oligodendrocyte precursor cell | 13 studies | 35% ± 12% | |
myeloid cell | 13 studies | 53% ± 21% | |
glutamatergic neuron | 12 studies | 48% ± 23% | |
pericyte | 11 studies | 27% ± 11% | |
endothelial cell of artery | 10 studies | 28% ± 15% | |
smooth muscle cell | 9 studies | 38% ± 15% | |
connective tissue cell | 9 studies | 29% ± 11% | |
mast cell | 9 studies | 36% ± 15% | |
alveolar macrophage | 8 studies | 66% ± 24% | |
GABAergic neuron | 8 studies | 38% ± 14% | |
mesothelial cell | 8 studies | 48% ± 16% | |
myofibroblast cell | 7 studies | 32% ± 18% | |
mononuclear phagocyte | 6 studies | 37% ± 23% | |
interneuron | 6 studies | 34% ± 17% | |
vein endothelial cell | 6 studies | 35% ± 9% | |
adipocyte | 6 studies | 31% ± 9% | |
epithelial cell | 6 studies | 48% ± 22% | |
neuron | 5 studies | 33% ± 11% | |
glial cell | 5 studies | 33% ± 14% | |
adventitial cell | 5 studies | 43% ± 17% | |
retinal rod cell | 5 studies | 52% ± 30% | |
capillary endothelial cell | 4 studies | 26% ± 8% | |
Mueller cell | 4 studies | 51% ± 19% | |
endothelial cell of vascular tree | 4 studies | 40% ± 16% | |
intermediate monocyte | 4 studies | 38% ± 15% | |
basal cell | 4 studies | 48% ± 23% | |
goblet cell | 4 studies | 34% ± 15% | |
endothelial cell of sinusoid | 3 studies | 36% ± 9% | |
hepatic stellate cell | 3 studies | 47% ± 9% | |
T cell | 3 studies | 23% ± 7% | |
glomerular endothelial cell | 3 studies | 26% ± 3% | |
granule cell | 3 studies | 44% ± 25% | |
megakaryocyte | 3 studies | 40% ± 15% | |
platelet | 3 studies | 18% ± 2% | |
endocardial cell | 3 studies | 53% ± 17% | |
tissue-resident macrophage | 3 studies | 43% ± 11% | |
retinal bipolar neuron | 3 studies | 54% ± 29% | |
GABAergic amacrine cell | 3 studies | 43% ± 12% | |
OFF-bipolar cell | 3 studies | 60% ± 30% | |
retinal ganglion cell | 3 studies | 31% ± 13% | |
rod bipolar cell | 3 studies | 42% ± 19% | |
amacrine cell | 3 studies | 41% ± 9% | |
retinal pigment epithelial cell | 3 studies | 49% ± 12% | |
ependymal cell | 3 studies | 59% ± 15% | |
chondrocyte | 3 studies | 61% ± 20% | |
neutrophil | 3 studies | 41% ± 25% | |
hematopoietic stem cell | 3 studies | 17% ± 2% | |
myoepithelial cell | 3 studies | 57% ± 22% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 6304.95 | 458 / 459 | 98% | 48.01 | 1092 / 1118 |
lung | 100% | 10265.17 | 578 / 578 | 93% | 23.11 | 1072 / 1155 |
ovary | 96% | 3850.39 | 172 / 180 | 97% | 22.44 | 418 / 430 |
thymus | 100% | 4809.46 | 650 / 653 | 93% | 18.00 | 563 / 605 |
kidney | 98% | 2892.04 | 87 / 89 | 94% | 33.29 | 849 / 901 |
prostate | 99% | 3887.27 | 243 / 245 | 92% | 15.71 | 464 / 502 |
esophagus | 100% | 4301.40 | 1443 / 1445 | 83% | 17.87 | 151 / 183 |
uterus | 100% | 5539.86 | 170 / 170 | 69% | 11.07 | 315 / 459 |
intestine | 98% | 3334.16 | 948 / 966 | 66% | 11.87 | 350 / 527 |
bladder | 100% | 5066.48 | 21 / 21 | 63% | 10.94 | 320 / 504 |
brain | 63% | 1538.27 | 1671 / 2642 | 93% | 22.84 | 659 / 705 |
adrenal gland | 97% | 5363.59 | 251 / 258 | 53% | 6.75 | 121 / 230 |
stomach | 55% | 1792.29 | 196 / 359 | 70% | 16.56 | 201 / 286 |
skin | 77% | 6629.55 | 1396 / 1809 | 47% | 6.25 | 220 / 472 |
pancreas | 16% | 313.34 | 54 / 328 | 94% | 32.11 | 168 / 178 |
blood vessel | 100% | 13346.74 | 1335 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 7666.13 | 1199 / 1204 | 0% | 0 | 0 / 0 |
spleen | 98% | 3047.58 | 235 / 241 | 0% | 0 | 0 / 0 |
heart | 88% | 3329.72 | 761 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 73% | 9.08 | 33 / 45 |
peripheral blood | 71% | 2768.19 | 659 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 59% | 5.04 | 17 / 29 |
muscle | 47% | 919.33 | 376 / 803 | 0% | 0 | 0 / 0 |
liver | 2% | 36.71 | 5 / 226 | 22% | 2.64 | 90 / 406 |
eye | 0% | 0 | 0 / 0 | 5% | 0.36 | 4 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0016020 | Cellular component | membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | PLXDC2 |
Protein name | Plexin domain-containing protein 2 (Tumor endothelial marker 7-related protein) |
Synonyms | UNQ2514/PRO6003 TEM7R |
Description | FUNCTION: May play a role in tumor angiogenesis. . |
Accessions | Q6UX71 ENST00000377252.5 [Q6UX71-1] ENST00000377242.7 [Q6UX71-2] |