PITHD1 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
natural killer cell	21 studies	21% ± 5%	Explore
CD4-positive, alpha-beta T cell	15 studies	20% ± 6%	Explore
CD8-positive, alpha-beta T cell	13 studies	20% ± 4%	Explore
regulatory T cell	13 studies	19% ± 3%	Explore
B cell	10 studies	21% ± 6%	Explore
fibroblast	10 studies	22% ± 8%	Explore
gamma-delta T cell	10 studies	24% ± 7%	Explore
T cell	9 studies	21% ± 8%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	9 studies	20% ± 4%	Explore
endothelial cell	9 studies	25% ± 8%	Explore
erythrocyte	8 studies	33% ± 17%	Explore
memory B cell	8 studies	18% ± 3%	Explore
naive B cell	7 studies	18% ± 3%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	7 studies	21% ± 5%	Explore
CD16-negative, CD56-bright natural killer cell, human	7 studies	21% ± 4%	Explore
CD16-positive, CD56-dim natural killer cell, human	7 studies	23% ± 3%	Explore
mature NK T cell	7 studies	21% ± 3%	Explore
mucosal invariant T cell	7 studies	21% ± 3%	Explore
effector memory CD8-positive, alpha-beta T cell	6 studies	24% ± 8%	Explore
epithelial cell	6 studies	33% ± 16%	Explore
T follicular helper cell	6 studies	20% ± 3%	Explore
CD4-positive, alpha-beta memory T cell	5 studies	21% ± 4%	Explore
smooth muscle cell	5 studies	21% ± 3%	Explore
CD8-positive, alpha-beta memory T cell	5 studies	26% ± 2%	Explore
basal cell	5 studies	24% ± 11%	Explore
innate lymphoid cell	5 studies	20% ± 3%	Explore
pancreatic A cell	4 studies	34% ± 3%	Explore
type B pancreatic cell	4 studies	34% ± 12%	Explore
effector CD8-positive, alpha-beta T cell	4 studies	19% ± 2%	Explore
non-classical monocyte	4 studies	27% ± 9%	Explore
retinal ganglion cell	4 studies	69% ± 25%	Explore
pericyte	4 studies	18% ± 2%	Explore
amacrine cell	4 studies	40% ± 16%	Explore
ciliated cell	4 studies	25% ± 10%	Explore
effector memory CD4-positive, alpha-beta T cell	4 studies	25% ± 9%	Explore
GABAergic neuron	4 studies	34% ± 7%	Explore
leukocyte	3 studies	22% ± 3%	Explore
classical monocyte	3 studies	24% ± 6%	Explore
conventional dendritic cell	3 studies	31% ± 13%	Explore
neuron	3 studies	31% ± 6%	Explore
erythroblast	3 studies	37% ± 24%	Explore
retinal bipolar neuron	3 studies	26% ± 8%	Explore
retina horizontal cell	3 studies	31% ± 9%	Explore
Mueller cell	3 studies	30% ± 6%	Explore
macrophage	3 studies	26% ± 5%	Explore
glutamatergic neuron	3 studies	48% ± 11%	Explore
intestinal crypt stem cell	3 studies	18% ± 1%	Explore
endothelial cell of vascular tree	3 studies	16% ± 0%	Explore
plasmacytoid dendritic cell	3 studies	23% ± 5%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	9 studies	21% ± 7%	Explore
eye	6 studies	23% ± 5%	Explore
lung	5 studies	19% ± 2%	Explore
brain	5 studies	28% ± 11%	Explore
pancreas	3 studies	34% ± 3%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	3200.77	1445 / 1445	100%	44.28	183 / 183
intestine	100%	2707.77	966 / 966	100%	65.53	527 / 527
ovary	100%	2695.02	180 / 180	100%	55.34	430 / 430
prostate	100%	3211.47	245 / 245	100%	122.94	502 / 502
uterus	100%	2884.54	170 / 170	100%	101.49	459 / 459
brain	100%	6694.65	2641 / 2642	100%	121.54	705 / 705
breast	100%	2921.99	459 / 459	100%	79.28	1116 / 1118
bladder	100%	2756.62	21 / 21	100%	75.29	503 / 504
skin	100%	3809.08	1809 / 1809	100%	87.83	471 / 472
kidney	100%	2185.26	89 / 89	100%	48.30	899 / 901
thymus	100%	2567.72	652 / 653	100%	116.74	604 / 605
liver	100%	1741.55	226 / 226	100%	41.63	404 / 406
lung	99%	2464.22	575 / 578	100%	70.24	1155 / 1155
pancreas	99%	1509.74	326 / 328	100%	60.38	178 / 178
stomach	100%	2384.18	359 / 359	99%	53.96	284 / 286
adrenal gland	100%	3081.59	258 / 258	99%	68.97	228 / 230
adipose	100%	2838.81	1204 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	100%	75.00	80 / 80
lymph node	0%	0	0 / 0	100%	89.87	29 / 29
spleen	100%	2863.95	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	96.99	45 / 45
ureter	0%	0	0 / 0	100%	68.40	1 / 1
blood vessel	100%	2682.61	1334 / 1335	0%	0	0 / 0
muscle	100%	3080.85	802 / 803	0%	0	0 / 0
peripheral blood	97%	2019.61	905 / 929	0%	0	0 / 0
heart	95%	1686.63	816 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0