PIGT report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
fibroblast	18 studies	26% ± 10%	Explore
ciliated cell	13 studies	29% ± 13%	Explore
natural killer cell	12 studies	22% ± 5%	Explore
CD16-positive, CD56-dim natural killer cell, human	10 studies	22% ± 4%	Explore
connective tissue cell	8 studies	27% ± 15%	Explore
goblet cell	8 studies	26% ± 9%	Explore
CD16-negative, CD56-bright natural killer cell, human	7 studies	19% ± 2%	Explore
plasmacytoid dendritic cell	7 studies	22% ± 6%	Explore
endothelial cell	6 studies	26% ± 8%	Explore
pericyte	6 studies	21% ± 4%	Explore
epithelial cell	6 studies	43% ± 17%	Explore
abnormal cell	6 studies	25% ± 8%	Explore
CD8-positive, alpha-beta T cell	5 studies	20% ± 5%	Explore
mature NK T cell	5 studies	17% ± 2%	Explore
myofibroblast cell	5 studies	24% ± 9%	Explore
endothelial cell of lymphatic vessel	5 studies	25% ± 6%	Explore
gamma-delta T cell	5 studies	20% ± 4%	Explore
plasma cell	4 studies	30% ± 12%	Explore
secretory cell	4 studies	22% ± 9%	Explore
pancreatic A cell	4 studies	46% ± 15%	Explore
classical monocyte	4 studies	25% ± 8%	Explore
effector memory CD8-positive, alpha-beta T cell	4 studies	18% ± 4%	Explore
smooth muscle cell	4 studies	23% ± 6%	Explore
adventitial cell	4 studies	26% ± 13%	Explore
oligodendrocyte	4 studies	22% ± 2%	Explore
macrophage	4 studies	24% ± 5%	Explore
regulatory T cell	4 studies	17% ± 0%	Explore
basal cell	4 studies	31% ± 11%	Explore
respiratory goblet cell	3 studies	28% ± 15%	Explore
type B pancreatic cell	3 studies	34% ± 9%	Explore
conventional dendritic cell	3 studies	30% ± 10%	Explore
non-classical monocyte	3 studies	30% ± 10%	Explore
plasmablast	3 studies	37% ± 20%	Explore
B cell	3 studies	20% ± 3%	Explore
endothelial cell of vascular tree	3 studies	18% ± 2%	Explore
endothelial cell of artery	3 studies	18% ± 2%	Explore
GABAergic neuron	3 studies	19% ± 2%	Explore
glutamatergic neuron	3 studies	22% ± 5%	Explore
dendritic cell	3 studies	39% ± 12%	Explore
pancreatic ductal cell	3 studies	40% ± 18%	Explore
enteroendocrine cell	3 studies	28% ± 14%	Explore
memory B cell	3 studies	18% ± 1%	Explore
luminal hormone-sensing cell of mammary gland	3 studies	24% ± 6%	Explore
neuron	3 studies	23% ± 6%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	7 studies	24% ± 7%	Explore
brain	5 studies	19% ± 1%	Explore
pancreas	3 studies	42% ± 9%	Explore
peripheral blood	3 studies	27% ± 1%	Explore
intestine	3 studies	24% ± 8%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	5178.81	1445 / 1445	100%	34.34	183 / 183
ovary	100%	5761.06	180 / 180	100%	45.39	430 / 430
pancreas	100%	3733.05	328 / 328	100%	27.90	178 / 178
stomach	100%	5767.86	359 / 359	100%	45.06	286 / 286
skin	100%	6489.33	1809 / 1809	100%	49.50	471 / 472
lung	100%	5960.92	577 / 578	100%	33.08	1152 / 1155
thymus	100%	6234.67	653 / 653	100%	27.40	602 / 605
intestine	100%	7178.41	966 / 966	99%	42.72	524 / 527
breast	100%	7129.93	459 / 459	99%	47.70	1111 / 1118
uterus	100%	7878.47	170 / 170	99%	32.04	456 / 459
prostate	100%	5381.77	245 / 245	99%	24.40	495 / 502
liver	100%	2766.07	225 / 226	99%	21.06	402 / 406
bladder	100%	7134.10	21 / 21	98%	33.92	495 / 504
kidney	100%	4946.39	89 / 89	98%	22.64	881 / 901
adrenal gland	100%	6451.33	258 / 258	97%	35.42	224 / 230
brain	96%	2865.45	2528 / 2642	100%	19.70	704 / 705
adipose	100%	6794.75	1204 / 1204	0%	0	0 / 0
blood vessel	100%	10158.64	1335 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	100%	32.04	80 / 80
lymph node	0%	0	0 / 0	100%	18.77	29 / 29
spleen	100%	4839.07	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	22.10	45 / 45
ureter	0%	0	0 / 0	100%	8.58	1 / 1
muscle	100%	4800.13	802 / 803	0%	0	0 / 0
heart	99%	8251.84	854 / 861	0%	0	0 / 0
peripheral blood	95%	3050.33	886 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0