Name | Number of supported studies | Average coverage | |
---|---|---|---|
regulatory T cell | 21 studies | 26% ± 8% | |
B cell | 14 studies | 25% ± 8% | |
mast cell | 12 studies | 36% ± 14% | |
oligodendrocyte | 11 studies | 33% ± 11% | |
non-classical monocyte | 10 studies | 25% ± 11% | |
endothelial cell | 10 studies | 26% ± 11% | |
oligodendrocyte precursor cell | 10 studies | 33% ± 14% | |
glutamatergic neuron | 9 studies | 48% ± 25% | |
microglial cell | 9 studies | 25% ± 7% | |
CD4-positive, alpha-beta T cell | 8 studies | 25% ± 9% | |
astrocyte | 8 studies | 28% ± 14% | |
macrophage | 7 studies | 39% ± 10% | |
memory B cell | 7 studies | 21% ± 4% | |
naive B cell | 7 studies | 20% ± 3% | |
T cell | 7 studies | 26% ± 9% | |
GABAergic neuron | 7 studies | 50% ± 18% | |
CD4-positive, alpha-beta memory T cell | 6 studies | 19% ± 2% | |
interneuron | 6 studies | 47% ± 21% | |
dendritic cell | 5 studies | 26% ± 2% | |
myeloid cell | 5 studies | 28% ± 10% | |
T follicular helper cell | 5 studies | 18% ± 2% | |
endothelial cell of lymphatic vessel | 5 studies | 26% ± 5% | |
monocyte | 5 studies | 30% ± 9% | |
neuron | 4 studies | 36% ± 12% | |
epithelial cell | 4 studies | 23% ± 7% | |
cardiac muscle cell | 4 studies | 20% ± 2% | |
lymphocyte | 4 studies | 34% ± 15% | |
GABAergic interneuron | 3 studies | 30% ± 4% | |
granule cell | 3 studies | 23% ± 3% | |
immature B cell | 3 studies | 19% ± 1% | |
amacrine cell | 3 studies | 21% ± 4% | |
glycinergic amacrine cell | 3 studies | 20% ± 2% | |
retinal cone cell | 3 studies | 19% ± 4% | |
effector memory CD4-positive, alpha-beta T cell | 3 studies | 19% ± 2% | |
leukocyte | 3 studies | 22% ± 5% | |
pericyte | 3 studies | 17% ± 2% | |
alveolar macrophage | 3 studies | 27% ± 8% | |
fibroblast | 3 studies | 19% ± 2% | |
natural killer cell | 3 studies | 16% ± 1% | |
transit amplifying cell | 3 studies | 36% ± 28% | |
mesothelial cell | 3 studies | 26% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 14 studies | 35% ± 21% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1301.07 | 459 / 459 | 100% | 16.09 | 1113 / 1118 |
ovary | 100% | 1442.34 | 180 / 180 | 99% | 10.04 | 427 / 430 |
lung | 99% | 1479.94 | 574 / 578 | 99% | 15.13 | 1147 / 1155 |
uterus | 100% | 1510.52 | 170 / 170 | 98% | 13.34 | 452 / 459 |
esophagus | 100% | 1387.33 | 1445 / 1445 | 98% | 13.13 | 180 / 183 |
bladder | 100% | 1551.95 | 21 / 21 | 97% | 10.70 | 491 / 504 |
thymus | 100% | 1228.85 | 651 / 653 | 97% | 7.22 | 586 / 605 |
brain | 96% | 1020.31 | 2548 / 2642 | 100% | 10.75 | 702 / 705 |
intestine | 100% | 1499.46 | 966 / 966 | 93% | 7.51 | 491 / 527 |
adrenal gland | 100% | 853.45 | 257 / 258 | 92% | 6.89 | 212 / 230 |
kidney | 99% | 985.76 | 88 / 89 | 91% | 8.05 | 821 / 901 |
skin | 100% | 1548.67 | 1803 / 1809 | 90% | 14.61 | 425 / 472 |
prostate | 100% | 1300.18 | 245 / 245 | 89% | 5.48 | 445 / 502 |
pancreas | 89% | 520.44 | 293 / 328 | 97% | 10.91 | 173 / 178 |
stomach | 92% | 749.81 | 329 / 359 | 93% | 7.99 | 267 / 286 |
liver | 77% | 375.48 | 173 / 226 | 56% | 3.55 | 229 / 406 |
lymph node | 0% | 0 | 0 / 0 | 100% | 14.76 | 29 / 29 |
muscle | 100% | 7651.07 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2694.49 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 13.79 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.01 | 1 / 1 |
adipose | 100% | 1575.11 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2600.07 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 97% | 1318.30 | 833 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 72% | 1367.54 | 668 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 34% | 1.73 | 27 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0016020 | Cellular component | membrane |
Gene name | PHTF2 |
Protein name | Protein PHTF2 PHTF2 protein |
Synonyms | |
Description | |
Accessions | ENST00000424760.5 [Q8N3S3-7] ENST00000248550.7 [Q8N3S3-1] ENST00000422959.8 [Q8N3S3-2] ENST00000416283.6 [Q8N3S3-1] ENST00000450574.5 [Q8N3S3-5] Q8WVD6 ENST00000415251.6 [Q8N3S3-6] Q8N3S3 ENST00000275575.11 [Q8N3S3-4] ENST00000307305.12 [Q8N3S3-3] |