Name | Number of supported studies | Average coverage | |
---|---|---|---|
B cell | 31 studies | 31% ± 12% | |
naive B cell | 19 studies | 30% ± 10% | |
memory B cell | 18 studies | 24% ± 10% | |
precursor B cell | 6 studies | 41% ± 12% | |
immature B cell | 5 studies | 40% ± 22% | |
pro-B cell | 4 studies | 35% ± 11% | |
astrocyte | 4 studies | 47% ± 6% | |
germinal center B cell | 3 studies | 29% ± 4% |
Insufficient scRNA-seq data for expression of PAX5 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 65% | 40.78 | 377 / 578 | 46% | 2.22 | 535 / 1155 |
lymph node | 0% | 0 | 0 / 0 | 100% | 113.23 | 29 / 29 |
spleen | 100% | 4311.03 | 241 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 4316.37 | 903 / 929 | 0% | 0 | 0 / 0 |
intestine | 46% | 634.45 | 443 / 966 | 31% | 2.21 | 161 / 527 |
esophagus | 21% | 23.03 | 302 / 1445 | 50% | 2.54 | 91 / 183 |
stomach | 32% | 26.92 | 116 / 359 | 37% | 2.67 | 105 / 286 |
tonsil | 0% | 0 | 0 / 0 | 58% | 3.86 | 26 / 45 |
prostate | 27% | 25.29 | 67 / 245 | 21% | 0.59 | 103 / 502 |
bladder | 24% | 24.29 | 5 / 21 | 20% | 1.23 | 99 / 504 |
breast | 21% | 9.80 | 96 / 459 | 20% | 1.23 | 228 / 1118 |
pancreas | 9% | 4.34 | 30 / 328 | 30% | 2.63 | 54 / 178 |
adrenal gland | 3% | 1.26 | 7 / 258 | 33% | 2.68 | 77 / 230 |
brain | 21% | 22.67 | 545 / 2642 | 12% | 0.48 | 82 / 705 |
adipose | 32% | 21.20 | 388 / 1204 | 0% | 0 | 0 / 0 |
kidney | 27% | 44.16 | 24 / 89 | 4% | 0.19 | 37 / 901 |
skin | 4% | 1.19 | 66 / 1809 | 26% | 2.91 | 125 / 472 |
liver | 24% | 7.70 | 55 / 226 | 6% | 0.30 | 23 / 406 |
thymus | 15% | 89.29 | 100 / 653 | 13% | 1.20 | 80 / 605 |
uterus | 2% | 0.38 | 3 / 170 | 25% | 0.83 | 117 / 459 |
muscle | 18% | 7.84 | 143 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 7% | 13.03 | 96 / 1335 | 0% | 0 | 0 / 0 |
ovary | 3% | 1.52 | 6 / 180 | 3% | 0.07 | 11 / 430 |
eye | 0% | 0 | 0 / 0 | 5% | 0.16 | 4 / 80 |
heart | 4% | 2.40 | 35 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0048701 | Biological process | embryonic cranial skeleton morphogenesis |
GO_0006366 | Biological process | transcription by RNA polymerase II |
GO_0021987 | Biological process | cerebral cortex development |
GO_0048856 | Biological process | anatomical structure development |
GO_0007283 | Biological process | spermatogenesis |
GO_0035914 | Biological process | skeletal muscle cell differentiation |
GO_0021670 | Biological process | lateral ventricle development |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0030183 | Biological process | B cell differentiation |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0030534 | Biological process | adult behavior |
GO_0005654 | Cellular component | nucleoplasm |
GO_0000785 | Cellular component | chromatin |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
Gene name | PAX5 |
Protein name | B cell specific activator protein variant insert 6/7 (Paired box 5) B cell specific activator protein variant delta 8 B cell specific activator protein variant delta 8/9 B cell specific activator protein variant delta 6/7/8 B cell specific activator protein variant A delta 2/8/9 B cell specific activator protein variant B delta 3/4 B cell specific activator protein variant B delta 2/3 B cell specific activator protein variant delta 6/7/8/9 B cell specific activator protein BSAP (B-cell specific transcription factor) (PAX5) (Transcription factor Pax-5) B cell specific activator protein variant delta 7/8 B-cell specific transcription factor (PAX5) (Tanscription factor PAX 5) Paired box 5 B cell specific activator protein variant delta 7 Paired box protein Pax-5 (B-cell-specific transcription factor) (BSAP) B cell specific activator protein variant delta 7/8/9 B cell specific activator protein B cell specific activator protein variant B delta 2 B cell specific activator protein variant A delta 2 |
Synonyms | PAX-5 |
Description | FUNCTION: Transcription factor that plays an essential role in commitment of lymphoid progenitors to the B-lymphocyte lineage . Fulfills a dual role by repressing B-lineage inappropriate genes and simultaneously activating B-lineage-specific genes . In turn, regulates cell adhesion and migration, induces V(H)-to-D(H)J(H) recombination, facilitates pre-B-cell receptor signaling and promotes development to the mature B-cell stage . Repression of the cohesin-release factor WAPL causes global changes of the chromosomal architecture in pro-B cells to facilitate the generation of a diverse antibody repertoire . .; FUNCTION: (Microbial infection) Plays an essential role in the maintenance of Epstein-Barr virus genome copy number within the host cell by promoting EBNA1/oriP-dependent binding and transcription . Participates also in the inhibition of lytic EBV reactivation by modulating viral BZLF1 activity . . |
Accessions | C0KTE2 ENST00000446742.5 [Q02548-10] C0KTF0 ENST00000523241.6 C0KTE9 ENST00000523493.5 [Q02548-11] ENST00000377852.7 [Q02548-6] ENST00000651550.1 C0KTE1 ENST00000524340.5 E7ES87 C0KTE3 Q9BXX4 ENST00000522932.1 C0KTE4 E7ERK2 ENST00000520154.6 ENST00000377847.6 [Q02548-7] C0KTF3 C0KTE8 ENST00000377840.6 [Q02548-5] Q02548 ENST00000414447.5 [Q02548-8] ENST00000377853.6 [Q02548-2] E7EQT0 C0KTE5 C0KTE6 C0KTF5 E7ERW5 C0KTF2 C0KTF4 ENST00000523145.5 H0YB47 ENST00000520281.5 [Q02548-9] C0KTE7 Q93057 ENST00000522003.5 ENST00000358127.9 [Q02548-1] |